Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1612 and Dsui_1613 are separated by 420 nucleotides
Dsui_1612: Dsui_1612 - hypothetical protein, at 1,695,969 to 1,696,277
_1612
Dsui_1613: Dsui_1613 - cytochrome c553, at 1,696,698 to 1,697,384
_1613
Position (kb)
1695
1696
1697 Strain fitness (log2 ratio)
-2
-1
0
1 at 1694.971 kb on - strand at 1695.018 kb on - strand at 1695.085 kb on + strand at 1695.092 kb on + strand at 1695.092 kb on + strand at 1695.100 kb on - strand at 1695.130 kb on - strand at 1695.279 kb on + strand at 1695.307 kb on + strand at 1695.438 kb on - strand at 1695.462 kb on - strand at 1695.503 kb on - strand at 1695.542 kb on - strand at 1695.641 kb on - strand at 1695.664 kb on + strand at 1695.683 kb on + strand at 1695.683 kb on + strand at 1695.754 kb on + strand at 1695.772 kb on + strand at 1695.785 kb on - strand at 1695.819 kb on + strand at 1695.827 kb on - strand at 1695.829 kb on - strand at 1695.865 kb on + strand at 1695.879 kb on - strand at 1696.000 kb on + strand, within Dsui_1612 at 1696.005 kb on + strand, within Dsui_1612 at 1696.008 kb on + strand, within Dsui_1612 at 1696.008 kb on + strand, within Dsui_1612 at 1696.016 kb on - strand, within Dsui_1612 at 1696.058 kb on + strand, within Dsui_1612 at 1696.161 kb on + strand, within Dsui_1612 at 1696.164 kb on - strand at 1696.194 kb on + strand, within Dsui_1612 at 1696.202 kb on - strand, within Dsui_1612 at 1696.271 kb on + strand at 1696.271 kb on + strand at 1696.279 kb on - strand at 1696.289 kb on + strand at 1696.307 kb on + strand at 1696.310 kb on - strand at 1696.336 kb on + strand at 1696.386 kb on - strand at 1696.447 kb on + strand at 1696.691 kb on - strand at 1696.746 kb on + strand at 1696.771 kb on + strand, within Dsui_1613 at 1696.908 kb on - strand, within Dsui_1613 at 1696.949 kb on + strand, within Dsui_1613 at 1696.949 kb on + strand at 1697.044 kb on + strand at 1697.044 kb on + strand, within Dsui_1613 at 1697.052 kb on - strand, within Dsui_1613 at 1697.113 kb on - strand, within Dsui_1613 at 1697.122 kb on - strand, within Dsui_1613 at 1697.172 kb on - strand, within Dsui_1613
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,694,971 - -0.4 1,695,018 - -2.4 1,695,085 + +0.6 1,695,092 + -1.7 1,695,092 + +0.6 1,695,100 - -0.4 1,695,130 - +0.6 1,695,279 + +0.6 1,695,307 + -1.0 1,695,438 - -1.4 1,695,462 - -0.4 1,695,503 - +0.6 1,695,542 - -2.4 1,695,641 - +0.6 1,695,664 + -1.4 1,695,683 + -0.4 1,695,683 + -2.4 1,695,754 + +0.6 1,695,772 + +0.6 1,695,785 - -0.4 1,695,819 + -2.7 1,695,827 - -0.4 1,695,829 - -0.4 1,695,865 + -0.4 1,695,879 - -1.4 1,696,000 + Dsui_1612 0.10 -1.0 1,696,005 + Dsui_1612 0.12 +0.6 1,696,008 + Dsui_1612 0.13 -1.4 1,696,008 + Dsui_1612 0.13 -0.4 1,696,016 - Dsui_1612 0.15 -1.0 1,696,058 + Dsui_1612 0.29 +0.6 1,696,161 + Dsui_1612 0.62 +0.6 1,696,164 - +0.6 1,696,194 + Dsui_1612 0.73 +0.6 1,696,202 - Dsui_1612 0.75 -1.0 1,696,271 + +0.6 1,696,271 + +0.6 1,696,279 - -1.0 1,696,289 + -2.7 1,696,307 + -1.4 1,696,310 - -1.4 1,696,336 + -1.0 1,696,386 - +0.6 1,696,447 + +0.6 1,696,691 - -0.4 1,696,746 + +0.6 1,696,771 + Dsui_1613 0.11 -1.0 1,696,908 - Dsui_1613 0.31 -0.2 1,696,949 + Dsui_1613 0.37 +0.6 1,696,949 + +0.6 1,697,044 + -0.4 1,697,044 + Dsui_1613 0.50 -1.0 1,697,052 - Dsui_1613 0.52 -0.4 1,697,113 - Dsui_1613 0.60 -0.7 1,697,122 - Dsui_1613 0.62 -0.4 1,697,172 - Dsui_1613 0.69 -1.0
Or see this region's nucleotide sequence