Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1492 and Dsui_1493 are separated by 16 nucleotides Dsui_1493 and Dsui_1494 are separated by 27 nucleotides
Dsui_1492: Dsui_1492 - ATPase with chaperone activity, ATP-binding subunit, at 1,553,581 to 1,556,430
_1492
Dsui_1493: Dsui_1493 - phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase, at 1,556,447 to 1,557,877
_1493
Dsui_1494: Dsui_1494 - ATP-dependent metalloprotease FtsH, at 1,557,905 to 1,559,734
_1494
Position (kb)
1556
1557
1558 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1555.537 kb on + strand, within Dsui_1492 at 1555.572 kb on - strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.766 kb on - strand, within Dsui_1492 at 1555.779 kb on - strand, within Dsui_1492 at 1555.943 kb on + strand, within Dsui_1492 at 1555.951 kb on - strand, within Dsui_1492 at 1556.112 kb on - strand, within Dsui_1492 at 1556.210 kb on - strand at 1556.259 kb on + strand at 1556.379 kb on - strand at 1556.448 kb on + strand at 1556.514 kb on - strand at 1556.558 kb on - strand at 1556.820 kb on - strand, within Dsui_1493 at 1556.825 kb on - strand, within Dsui_1493 at 1556.878 kb on + strand, within Dsui_1493 at 1556.977 kb on - strand, within Dsui_1493 at 1557.229 kb on + strand, within Dsui_1493 at 1557.233 kb on + strand, within Dsui_1493 at 1557.438 kb on - strand, within Dsui_1493 at 1557.553 kb on - strand, within Dsui_1493 at 1557.591 kb on + strand, within Dsui_1493 at 1557.617 kb on - strand, within Dsui_1493 at 1557.678 kb on + strand, within Dsui_1493 at 1557.678 kb on + strand, within Dsui_1493 at 1557.717 kb on + strand, within Dsui_1493 at 1557.717 kb on + strand, within Dsui_1493 at 1557.725 kb on + strand at 1557.727 kb on + strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.733 kb on - strand, within Dsui_1493 at 1557.735 kb on - strand at 1558.223 kb on - strand, within Dsui_1494 at 1558.225 kb on + strand, within Dsui_1494 at 1558.227 kb on + strand, within Dsui_1494 at 1558.340 kb on - strand, within Dsui_1494 at 1558.361 kb on + strand, within Dsui_1494 at 1558.404 kb on - strand, within Dsui_1494 at 1558.571 kb on + strand, within Dsui_1494
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,555,537 + Dsui_1492 0.69 -0.3 1,555,572 - Dsui_1492 0.70 -0.3 1,555,663 + Dsui_1492 0.73 -1.1 1,555,663 + Dsui_1492 0.73 -0.9 1,555,663 + Dsui_1492 0.73 -1.3 1,555,766 - Dsui_1492 0.77 -0.9 1,555,779 - Dsui_1492 0.77 -1.3 1,555,943 + Dsui_1492 0.83 -0.9 1,555,951 - Dsui_1492 0.83 +0.7 1,556,112 - Dsui_1492 0.89 +0.7 1,556,210 - +0.7 1,556,259 + +0.5 1,556,379 - -1.9 1,556,448 + -0.3 1,556,514 - +0.7 1,556,558 - -1.6 1,556,820 - Dsui_1493 0.26 -0.3 1,556,825 - Dsui_1493 0.26 +0.7 1,556,878 + Dsui_1493 0.30 -1.6 1,556,977 - Dsui_1493 0.37 -0.3 1,557,229 + Dsui_1493 0.55 +0.1 1,557,233 + Dsui_1493 0.55 -2.6 1,557,438 - Dsui_1493 0.69 -1.3 1,557,553 - Dsui_1493 0.77 -0.9 1,557,591 + Dsui_1493 0.80 -0.9 1,557,617 - Dsui_1493 0.82 +0.7 1,557,678 + Dsui_1493 0.86 -0.3 1,557,678 + Dsui_1493 0.86 +0.7 1,557,717 + Dsui_1493 0.89 +0.7 1,557,717 + Dsui_1493 0.89 +2.7 1,557,725 + -0.3 1,557,727 + Dsui_1493 0.89 -1.6 1,557,733 - Dsui_1493 0.90 -1.6 1,557,733 - Dsui_1493 0.90 -0.3 1,557,733 - Dsui_1493 0.90 -1.6 1,557,735 - -0.3 1,558,223 - Dsui_1494 0.17 -0.3 1,558,225 + Dsui_1494 0.17 +0.7 1,558,227 + Dsui_1494 0.18 -1.6 1,558,340 - Dsui_1494 0.24 +0.7 1,558,361 + Dsui_1494 0.25 +1.7 1,558,404 - Dsui_1494 0.27 +0.7 1,558,571 + Dsui_1494 0.36 -0.3
Or see this region's nucleotide sequence