Strain Fitness in Dechlorosoma suillum PS around Dsui_1433

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1432 and Dsui_1433 are separated by 8 nucleotidesDsui_1433 and Dsui_1434 overlap by 1 nucleotidesDsui_1434 and Dsui_1435 overlap by 1 nucleotides Dsui_1432: Dsui_1432 - chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 1,486,202 to 1,487,329 _1432 Dsui_1433: Dsui_1433 - chemotaxis protein, at 1,487,338 to 1,487,835 _1433 Dsui_1434: Dsui_1434 - methylase of chemotaxis methyl-accepting protein, at 1,487,835 to 1,488,647 _1434 Dsui_1435: Dsui_1435 - chemotaxis signal transduction protein, at 1,488,647 to 1,489,204 _1435 Position (kb) 1487 1488Strain fitness (log2 ratio) -2 -1 0 1at 1486.445 kb on - strand, within Dsui_1432at 1486.472 kb on + strand, within Dsui_1432at 1486.485 kb on - strand, within Dsui_1432at 1486.503 kb on + strand, within Dsui_1432at 1486.513 kb on - strand, within Dsui_1432at 1486.620 kb on + strand, within Dsui_1432at 1487.035 kb on + strand, within Dsui_1432at 1487.077 kb on + strand, within Dsui_1432at 1487.077 kb on + strand, within Dsui_1432at 1487.120 kb on - strand, within Dsui_1432at 1487.194 kb on - strand, within Dsui_1432at 1487.216 kb on - strand, within Dsui_1432at 1487.226 kb on - strandat 1487.350 kb on + strandat 1487.423 kb on + strand, within Dsui_1433at 1487.431 kb on + strand, within Dsui_1433at 1487.866 kb on + strandat 1487.874 kb on - strandat 1487.888 kb on + strandat 1487.988 kb on + strand, within Dsui_1434at 1487.988 kb on + strand, within Dsui_1434at 1487.991 kb on - strand, within Dsui_1434at 1488.030 kb on - strand, within Dsui_1434at 1488.207 kb on - strand, within Dsui_1434at 1488.286 kb on + strand, within Dsui_1434at 1488.286 kb on + strand, within Dsui_1434at 1488.673 kb on - strandat 1488.724 kb on + strand, within Dsui_1435

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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1,486,445 - Dsui_1432 0.22 -0.5
1,486,472 + Dsui_1432 0.24 +0.7
1,486,485 - Dsui_1432 0.25 -0.5
1,486,503 + Dsui_1432 0.27 -1.9
1,486,513 - Dsui_1432 0.28 -0.2
1,486,620 + Dsui_1432 0.37 -2.3
1,487,035 + Dsui_1432 0.74 -0.3
1,487,077 + Dsui_1432 0.78 -1.3
1,487,077 + Dsui_1432 0.78 -1.7
1,487,120 - Dsui_1432 0.81 -0.7
1,487,194 - Dsui_1432 0.88 -0.3
1,487,216 - Dsui_1432 0.90 -0.5
1,487,226 - -0.4
1,487,350 + +0.7
1,487,423 + Dsui_1433 0.17 -1.3
1,487,431 + Dsui_1433 0.19 -1.7
1,487,866 + -1.7
1,487,874 - -0.1
1,487,888 + -0.3
1,487,988 + Dsui_1434 0.19 +0.7
1,487,988 + Dsui_1434 0.19 +0.7
1,487,991 - Dsui_1434 0.19 -0.4
1,488,030 - Dsui_1434 0.24 -0.1
1,488,207 - Dsui_1434 0.46 -0.0
1,488,286 + Dsui_1434 0.55 +0.7
1,488,286 + Dsui_1434 0.55 -1.3
1,488,673 - -0.1
1,488,724 + Dsui_1435 0.14 -0.9

Or see this region's nucleotide sequence