Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1230 and Dsui_1231 are separated by 0 nucleotides Dsui_1231 and Dsui_1232 are separated by 76 nucleotides
Dsui_1230: Dsui_1230 - TRAP-type uncharacterized transport system, periplasmic component, at 1,287,730 to 1,289,085
_1230
Dsui_1231: Dsui_1231 - ATPase involved in chromosome partitioning, at 1,289,086 to 1,289,709
_1231
Dsui_1232: Dsui_1232 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 1,289,786 to 1,290,874
_1232
Position (kb)
1289
1290 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1288.289 kb on + strand, within Dsui_1230 at 1288.289 kb on + strand, within Dsui_1230 at 1288.312 kb on + strand, within Dsui_1230 at 1288.422 kb on + strand, within Dsui_1230 at 1288.430 kb on - strand at 1288.430 kb on - strand, within Dsui_1230 at 1288.472 kb on - strand, within Dsui_1230 at 1288.516 kb on - strand, within Dsui_1230 at 1288.600 kb on + strand, within Dsui_1230 at 1288.608 kb on - strand, within Dsui_1230 at 1288.656 kb on - strand, within Dsui_1230 at 1288.684 kb on - strand, within Dsui_1230 at 1288.697 kb on + strand, within Dsui_1230 at 1288.705 kb on - strand at 1288.901 kb on + strand, within Dsui_1230 at 1288.954 kb on + strand at 1288.986 kb on - strand at 1288.988 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1288.998 kb on + strand at 1289.000 kb on + strand at 1289.006 kb on - strand at 1289.006 kb on - strand at 1289.006 kb on - strand at 1289.006 kb on - strand at 1289.047 kb on - strand at 1289.129 kb on + strand at 1289.134 kb on + strand at 1289.195 kb on + strand, within Dsui_1231 at 1289.277 kb on - strand, within Dsui_1231 at 1289.353 kb on + strand, within Dsui_1231 at 1289.361 kb on - strand, within Dsui_1231 at 1289.361 kb on - strand, within Dsui_1231 at 1289.366 kb on + strand, within Dsui_1231 at 1289.381 kb on + strand, within Dsui_1231 at 1289.384 kb on - strand, within Dsui_1231 at 1289.474 kb on + strand, within Dsui_1231 at 1289.477 kb on - strand, within Dsui_1231 at 1289.507 kb on - strand, within Dsui_1231 at 1289.632 kb on - strand, within Dsui_1231 at 1289.679 kb on + strand at 1289.679 kb on + strand at 1289.874 kb on + strand at 1289.882 kb on - strand at 1289.985 kb on - strand, within Dsui_1232 at 1289.993 kb on - strand, within Dsui_1232 at 1290.138 kb on + strand, within Dsui_1232 at 1290.141 kb on - strand, within Dsui_1232 at 1290.149 kb on - strand, within Dsui_1232 at 1290.156 kb on - strand, within Dsui_1232 at 1290.165 kb on - strand, within Dsui_1232 at 1290.181 kb on - strand, within Dsui_1232 at 1290.183 kb on + strand, within Dsui_1232 at 1290.297 kb on + strand, within Dsui_1232 at 1290.328 kb on + strand, within Dsui_1232 at 1290.511 kb on + strand, within Dsui_1232 at 1290.556 kb on - strand, within Dsui_1232 at 1290.564 kb on + strand, within Dsui_1232
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 1,288,289 + Dsui_1230 0.41 -3.0 1,288,289 + Dsui_1230 0.41 -0.4 1,288,312 + Dsui_1230 0.43 -0.4 1,288,422 + Dsui_1230 0.51 -0.2 1,288,430 - +0.6 1,288,430 - Dsui_1230 0.52 -1.4 1,288,472 - Dsui_1230 0.55 -1.0 1,288,516 - Dsui_1230 0.58 -1.4 1,288,600 + Dsui_1230 0.64 -0.7 1,288,608 - Dsui_1230 0.65 +0.6 1,288,656 - Dsui_1230 0.68 +0.6 1,288,684 - Dsui_1230 0.70 -1.0 1,288,697 + Dsui_1230 0.71 -0.7 1,288,705 - +0.6 1,288,901 + Dsui_1230 0.86 -0.7 1,288,954 + -0.7 1,288,986 - +0.6 1,288,988 + -0.2 1,288,998 + -0.5 1,288,998 + -0.3 1,288,998 + -2.1 1,288,998 + -0.2 1,288,998 + -0.4 1,288,998 + -1.5 1,288,998 + -1.1 1,288,998 + -0.5 1,289,000 + +1.0 1,289,006 - +0.6 1,289,006 - -2.0 1,289,006 - -1.7 1,289,006 - -0.4 1,289,047 - -0.4 1,289,129 + -0.7 1,289,134 + -0.3 1,289,195 + Dsui_1231 0.17 -0.2 1,289,277 - Dsui_1231 0.31 -1.0 1,289,353 + Dsui_1231 0.43 -0.5 1,289,361 - Dsui_1231 0.44 -1.4 1,289,361 - Dsui_1231 0.44 +0.6 1,289,366 + Dsui_1231 0.45 -0.9 1,289,381 + Dsui_1231 0.47 -0.4 1,289,384 - Dsui_1231 0.48 -0.4 1,289,474 + Dsui_1231 0.62 -0.2 1,289,477 - Dsui_1231 0.63 -2.0 1,289,507 - Dsui_1231 0.67 +0.6 1,289,632 - Dsui_1231 0.88 -1.0 1,289,679 + -0.9 1,289,679 + -0.4 1,289,874 + -1.4 1,289,882 - +0.1 1,289,985 - Dsui_1232 0.18 -0.3 1,289,993 - Dsui_1232 0.19 -0.6 1,290,138 + Dsui_1232 0.32 -1.4 1,290,141 - Dsui_1232 0.33 -0.1 1,290,149 - Dsui_1232 0.33 -0.3 1,290,156 - Dsui_1232 0.34 -0.6 1,290,165 - Dsui_1232 0.35 -0.3 1,290,181 - Dsui_1232 0.36 -1.0 1,290,183 + Dsui_1232 0.36 -0.5 1,290,297 + Dsui_1232 0.47 -1.0 1,290,328 + Dsui_1232 0.50 -2.2 1,290,511 + Dsui_1232 0.67 +0.6 1,290,556 - Dsui_1232 0.71 -0.4 1,290,564 + Dsui_1232 0.71 +0.6
Or see this region's nucleotide sequence