Strain Fitness in Dechlorosoma suillum PS around Dsui_1086

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1085 and Dsui_1086 overlap by 4 nucleotidesDsui_1086 and Dsui_1087 are separated by 3 nucleotides Dsui_1085: Dsui_1085 - TnsA endonuclease N terminal protein, at 1,120,193 to 1,121,242 _1085 Dsui_1086: Dsui_1086 - hypothetical protein, at 1,121,239 to 1,123,611 _1086 Dsui_1087: Dsui_1087 - hypothetical protein, at 1,123,615 to 1,125,114 _1087 Position (kb) 1121 1122 1123 1124Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1120.251 kb on + strandat 1120.276 kb on - strandat 1120.362 kb on + strand, within Dsui_1085at 1120.370 kb on - strand, within Dsui_1085at 1120.392 kb on - strand, within Dsui_1085at 1120.422 kb on + strand, within Dsui_1085at 1120.422 kb on + strand, within Dsui_1085at 1120.422 kb on + strand, within Dsui_1085at 1120.430 kb on - strand, within Dsui_1085at 1120.430 kb on - strand, within Dsui_1085at 1120.456 kb on + strand, within Dsui_1085at 1120.459 kb on - strand, within Dsui_1085at 1120.477 kb on + strand, within Dsui_1085at 1120.497 kb on - strand, within Dsui_1085at 1120.565 kb on - strand, within Dsui_1085at 1120.565 kb on - strand, within Dsui_1085at 1120.576 kb on + strand, within Dsui_1085at 1120.620 kb on - strand, within Dsui_1085at 1120.620 kb on - strand, within Dsui_1085at 1120.752 kb on - strand, within Dsui_1085at 1120.791 kb on + strand, within Dsui_1085at 1120.791 kb on + strand, within Dsui_1085at 1120.791 kb on + strand, within Dsui_1085at 1120.791 kb on + strand, within Dsui_1085at 1120.799 kb on - strand, within Dsui_1085at 1120.831 kb on - strand, within Dsui_1085at 1120.846 kb on + strand, within Dsui_1085at 1120.944 kb on + strand, within Dsui_1085at 1120.961 kb on + strand, within Dsui_1085at 1120.981 kb on - strand, within Dsui_1085at 1121.054 kb on + strand, within Dsui_1085at 1121.066 kb on - strand, within Dsui_1085at 1121.077 kb on - strand, within Dsui_1085at 1121.100 kb on - strand, within Dsui_1085at 1121.105 kb on - strand, within Dsui_1085at 1121.164 kb on + strandat 1121.172 kb on - strandat 1121.172 kb on - strandat 1121.172 kb on - strandat 1121.172 kb on - strandat 1121.193 kb on + strandat 1121.195 kb on - strandat 1121.249 kb on - strandat 1121.283 kb on + strandat 1121.285 kb on + strandat 1121.285 kb on + strandat 1121.291 kb on - strandat 1121.389 kb on + strandat 1121.401 kb on + strandat 1121.409 kb on - strandat 1121.409 kb on - strandat 1121.423 kb on + strandat 1121.423 kb on + strandat 1121.426 kb on - strandat 1121.431 kb on - strandat 1121.441 kb on - strandat 1121.456 kb on - strandat 1121.500 kb on + strand, within Dsui_1086at 1121.517 kb on + strand, within Dsui_1086at 1121.597 kb on + strand, within Dsui_1086at 1121.605 kb on - strand, within Dsui_1086at 1121.605 kb on - strand, within Dsui_1086at 1121.678 kb on + strand, within Dsui_1086at 1121.768 kb on - strand, within Dsui_1086at 1121.773 kb on - strand, within Dsui_1086at 1121.781 kb on + strand, within Dsui_1086at 1121.789 kb on - strand, within Dsui_1086at 1121.811 kb on + strand, within Dsui_1086at 1121.829 kb on - strand, within Dsui_1086at 1121.831 kb on - strand, within Dsui_1086at 1121.845 kb on - strand, within Dsui_1086at 1121.913 kb on + strand, within Dsui_1086at 1121.916 kb on - strand, within Dsui_1086at 1121.921 kb on - strand, within Dsui_1086at 1121.923 kb on + strand, within Dsui_1086at 1121.931 kb on - strand, within Dsui_1086at 1121.970 kb on + strand, within Dsui_1086at 1121.977 kb on - strand, within Dsui_1086at 1122.007 kb on + strand, within Dsui_1086at 1122.089 kb on - strand, within Dsui_1086at 1122.122 kb on + strand, within Dsui_1086at 1122.122 kb on + strand, within Dsui_1086at 1122.147 kb on - strand, within Dsui_1086at 1122.202 kb on + strand, within Dsui_1086at 1122.239 kb on - strand, within Dsui_1086at 1122.277 kb on + strand, within Dsui_1086at 1122.287 kb on + strand, within Dsui_1086at 1122.342 kb on - strand, within Dsui_1086at 1122.375 kb on + strand, within Dsui_1086at 1122.380 kb on + strand, within Dsui_1086at 1122.432 kb on + strand, within Dsui_1086at 1122.433 kb on + strand, within Dsui_1086at 1122.434 kb on - strand, within Dsui_1086at 1122.438 kb on + strand, within Dsui_1086at 1122.443 kb on + strand, within Dsui_1086at 1122.446 kb on - strand, within Dsui_1086at 1122.451 kb on - strand, within Dsui_1086at 1122.451 kb on - strand, within Dsui_1086at 1122.451 kb on - strand, within Dsui_1086at 1122.451 kb on - strand, within Dsui_1086at 1122.506 kb on - strand, within Dsui_1086at 1122.522 kb on - strand, within Dsui_1086at 1122.544 kb on - strand, within Dsui_1086at 1122.544 kb on - strand, within Dsui_1086at 1122.637 kb on - strand, within Dsui_1086at 1122.670 kb on + strand, within Dsui_1086at 1122.678 kb on - strand, within Dsui_1086at 1122.678 kb on - strand, within Dsui_1086at 1122.708 kb on - strand, within Dsui_1086at 1122.779 kb on - strand, within Dsui_1086at 1122.797 kb on + strand, within Dsui_1086at 1122.845 kb on + strand, within Dsui_1086at 1122.853 kb on - strand, within Dsui_1086at 1122.950 kb on - strand, within Dsui_1086at 1122.958 kb on + strand, within Dsui_1086at 1122.966 kb on - strand, within Dsui_1086at 1122.987 kb on + strand, within Dsui_1086at 1122.993 kb on + strand, within Dsui_1086at 1123.004 kb on + strand, within Dsui_1086at 1123.004 kb on + strand, within Dsui_1086at 1123.004 kb on + strand, within Dsui_1086at 1123.012 kb on - strand, within Dsui_1086at 1123.012 kb on - strand, within Dsui_1086at 1123.012 kb on - strand, within Dsui_1086at 1123.012 kb on - strand, within Dsui_1086at 1123.012 kb on - strand, within Dsui_1086at 1123.014 kb on + strand, within Dsui_1086at 1123.014 kb on + strand, within Dsui_1086at 1123.022 kb on - strand, within Dsui_1086at 1123.022 kb on - strand, within Dsui_1086at 1123.043 kb on + strand, within Dsui_1086at 1123.053 kb on + strand, within Dsui_1086at 1123.070 kb on + strand, within Dsui_1086at 1123.084 kb on + strand, within Dsui_1086at 1123.094 kb on + strand, within Dsui_1086at 1123.094 kb on + strand, within Dsui_1086at 1123.099 kb on - strand, within Dsui_1086at 1123.101 kb on + strand, within Dsui_1086at 1123.101 kb on + strand, within Dsui_1086at 1123.109 kb on - strand, within Dsui_1086at 1123.115 kb on + strand, within Dsui_1086at 1123.148 kb on - strand, within Dsui_1086at 1123.234 kb on + strand, within Dsui_1086at 1123.283 kb on - strand, within Dsui_1086at 1123.283 kb on - strand, within Dsui_1086at 1123.291 kb on - strand, within Dsui_1086at 1123.354 kb on + strand, within Dsui_1086at 1123.362 kb on - strand, within Dsui_1086at 1123.362 kb on - strand, within Dsui_1086at 1123.374 kb on + strandat 1123.374 kb on + strandat 1123.374 kb on + strandat 1123.382 kb on - strandat 1123.386 kb on + strandat 1123.394 kb on - strandat 1123.396 kb on - strandat 1123.424 kb on - strandat 1123.494 kb on + strandat 1123.502 kb on - strandat 1123.580 kb on - strandat 1123.597 kb on + strandat 1123.605 kb on + strandat 1123.605 kb on + strandat 1123.605 kb on + strandat 1123.610 kb on + strandat 1123.613 kb on - strandat 1123.613 kb on - strandat 1123.618 kb on - strandat 1123.618 kb on - strandat 1123.618 kb on - strandat 1123.666 kb on + strandat 1123.678 kb on + strandat 1123.686 kb on + strandat 1123.695 kb on - strandat 1123.696 kb on + strandat 1123.738 kb on - strandat 1123.757 kb on - strandat 1123.757 kb on - strandat 1123.762 kb on - strandat 1123.810 kb on + strand, within Dsui_1087at 1123.817 kb on + strand, within Dsui_1087at 1123.817 kb on + strand, within Dsui_1087at 1123.817 kb on + strand, within Dsui_1087at 1123.817 kb on + strand, within Dsui_1087at 1123.825 kb on - strand, within Dsui_1087at 1123.825 kb on - strand, within Dsui_1087at 1123.973 kb on - strand, within Dsui_1087at 1124.002 kb on + strand, within Dsui_1087at 1124.027 kb on + strand, within Dsui_1087at 1124.035 kb on - strand, within Dsui_1087at 1124.081 kb on + strand, within Dsui_1087at 1124.081 kb on + strand, within Dsui_1087at 1124.086 kb on + strand, within Dsui_1087at 1124.086 kb on + strand, within Dsui_1087at 1124.089 kb on - strand, within Dsui_1087at 1124.089 kb on - strand, within Dsui_1087at 1124.091 kb on + strand, within Dsui_1087at 1124.091 kb on + strand, within Dsui_1087at 1124.091 kb on + strand, within Dsui_1087at 1124.099 kb on - strand, within Dsui_1087at 1124.172 kb on + strand, within Dsui_1087at 1124.217 kb on - strand, within Dsui_1087at 1124.217 kb on - strand, within Dsui_1087at 1124.237 kb on - strand, within Dsui_1087at 1124.268 kb on + strand, within Dsui_1087at 1124.275 kb on + strand, within Dsui_1087at 1124.297 kb on + strand, within Dsui_1087at 1124.334 kb on - strand, within Dsui_1087at 1124.408 kb on + strand, within Dsui_1087at 1124.408 kb on + strand, within Dsui_1087at 1124.416 kb on - strand, within Dsui_1087at 1124.416 kb on - strand, within Dsui_1087at 1124.416 kb on - strand, within Dsui_1087at 1124.486 kb on + strand, within Dsui_1087at 1124.494 kb on - strand, within Dsui_1087at 1124.494 kb on - strand, within Dsui_1087at 1124.503 kb on - strand, within Dsui_1087at 1124.545 kb on - strand, within Dsui_1087at 1124.545 kb on - strand, within Dsui_1087at 1124.561 kb on - strand, within Dsui_1087

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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1,120,251 + -0.5
1,120,276 - +0.7
1,120,362 + Dsui_1085 0.16 +0.7
1,120,370 - Dsui_1085 0.17 -0.9
1,120,392 - Dsui_1085 0.19 +0.7
1,120,422 + Dsui_1085 0.22 -0.3
1,120,422 + Dsui_1085 0.22 +0.7
1,120,422 + Dsui_1085 0.22 +0.7
1,120,430 - Dsui_1085 0.23 +0.7
1,120,430 - Dsui_1085 0.23 -0.3
1,120,456 + Dsui_1085 0.25 -1.2
1,120,459 - Dsui_1085 0.25 -0.9
1,120,477 + Dsui_1085 0.27 +0.7
1,120,497 - Dsui_1085 0.29 +0.7
1,120,565 - Dsui_1085 0.35 +0.7
1,120,565 - Dsui_1085 0.35 -0.9
1,120,576 + Dsui_1085 0.36 -1.4
1,120,620 - Dsui_1085 0.41 +0.7
1,120,620 - Dsui_1085 0.41 -0.3
1,120,752 - Dsui_1085 0.53 -0.3
1,120,791 + Dsui_1085 0.57 +0.7
1,120,791 + Dsui_1085 0.57 -0.3
1,120,791 + Dsui_1085 0.57 -2.1
1,120,791 + Dsui_1085 0.57 -2.8
1,120,799 - Dsui_1085 0.58 -0.3
1,120,831 - Dsui_1085 0.61 -0.9
1,120,846 + Dsui_1085 0.62 -0.1
1,120,944 + Dsui_1085 0.72 +0.7
1,120,961 + Dsui_1085 0.73 -0.3
1,120,981 - Dsui_1085 0.75 -0.9
1,121,054 + Dsui_1085 0.82 -0.0
1,121,066 - Dsui_1085 0.83 -1.3
1,121,077 - Dsui_1085 0.84 -0.3
1,121,100 - Dsui_1085 0.86 +0.7
1,121,105 - Dsui_1085 0.87 +0.7
1,121,164 + -2.0
1,121,172 - +0.7
1,121,172 - +0.7
1,121,172 - +0.7
1,121,172 - +0.7
1,121,193 + -1.7
1,121,195 - -0.9
1,121,249 - -0.3
1,121,283 + +0.7
1,121,285 + -0.9
1,121,285 + -1.7
1,121,291 - +0.7
1,121,389 + +0.7
1,121,401 + +0.7
1,121,409 - -0.3
1,121,409 - +0.7
1,121,423 + -0.9
1,121,423 + -1.5
1,121,426 - +0.1
1,121,431 - +0.7
1,121,441 - +0.7
1,121,456 - -1.3
1,121,500 + Dsui_1086 0.11 -0.3
1,121,517 + Dsui_1086 0.12 -0.9
1,121,597 + Dsui_1086 0.15 -0.3
1,121,605 - Dsui_1086 0.15 +0.7
1,121,605 - Dsui_1086 0.15 -2.1
1,121,678 + Dsui_1086 0.18 -1.3
1,121,768 - Dsui_1086 0.22 -0.9
1,121,773 - Dsui_1086 0.23 -1.3
1,121,781 + Dsui_1086 0.23 -0.4
1,121,789 - Dsui_1086 0.23 +0.7
1,121,811 + Dsui_1086 0.24 +0.7
1,121,829 - Dsui_1086 0.25 +0.7
1,121,831 - Dsui_1086 0.25 +0.7
1,121,845 - Dsui_1086 0.26 -0.9
1,121,913 + Dsui_1086 0.28 -0.7
1,121,916 - Dsui_1086 0.29 -0.3
1,121,921 - Dsui_1086 0.29 -0.9
1,121,923 + Dsui_1086 0.29 -2.1
1,121,931 - Dsui_1086 0.29 -1.7
1,121,970 + Dsui_1086 0.31 -1.1
1,121,977 - Dsui_1086 0.31 +0.7
1,122,007 + Dsui_1086 0.32 -1.3
1,122,089 - Dsui_1086 0.36 +0.7
1,122,122 + Dsui_1086 0.37 -2.7
1,122,122 + Dsui_1086 0.37 -0.1
1,122,147 - Dsui_1086 0.38 -2.0
1,122,202 + Dsui_1086 0.41 +0.7
1,122,239 - Dsui_1086 0.42 +0.7
1,122,277 + Dsui_1086 0.44 -1.2
1,122,287 + Dsui_1086 0.44 +0.7
1,122,342 - Dsui_1086 0.46 -0.9
1,122,375 + Dsui_1086 0.48 -0.9
1,122,380 + Dsui_1086 0.48 -1.3
1,122,432 + Dsui_1086 0.50 -1.3
1,122,433 + Dsui_1086 0.50 -0.3
1,122,434 - Dsui_1086 0.50 -0.9
1,122,438 + Dsui_1086 0.51 +0.7
1,122,443 + Dsui_1086 0.51 -0.9
1,122,446 - Dsui_1086 0.51 -2.1
1,122,451 - Dsui_1086 0.51 +0.7
1,122,451 - Dsui_1086 0.51 -0.9
1,122,451 - Dsui_1086 0.51 +0.7
1,122,451 - Dsui_1086 0.51 -0.9
1,122,506 - Dsui_1086 0.53 -1.9
1,122,522 - Dsui_1086 0.54 +0.7
1,122,544 - Dsui_1086 0.55 +0.7
1,122,544 - Dsui_1086 0.55 -0.3
1,122,637 - Dsui_1086 0.59 +0.7
1,122,670 + Dsui_1086 0.60 -0.9
1,122,678 - Dsui_1086 0.61 +0.7
1,122,678 - Dsui_1086 0.61 +1.7
1,122,708 - Dsui_1086 0.62 +0.7
1,122,779 - Dsui_1086 0.65 -0.3
1,122,797 + Dsui_1086 0.66 +0.7
1,122,845 + Dsui_1086 0.68 +0.7
1,122,853 - Dsui_1086 0.68 -0.9
1,122,950 - Dsui_1086 0.72 -0.9
1,122,958 + Dsui_1086 0.72 +0.7
1,122,966 - Dsui_1086 0.73 -0.3
1,122,987 + Dsui_1086 0.74 -3.1
1,122,993 + Dsui_1086 0.74 -0.9
1,123,004 + Dsui_1086 0.74 -1.9
1,123,004 + Dsui_1086 0.74 +0.7
1,123,004 + Dsui_1086 0.74 +2.3
1,123,012 - Dsui_1086 0.75 -2.3
1,123,012 - Dsui_1086 0.75 -0.9
1,123,012 - Dsui_1086 0.75 +0.7
1,123,012 - Dsui_1086 0.75 +0.7
1,123,012 - Dsui_1086 0.75 +0.7
1,123,014 + Dsui_1086 0.75 +0.3
1,123,014 + Dsui_1086 0.75 +0.7
1,123,022 - Dsui_1086 0.75 -1.7
1,123,022 - Dsui_1086 0.75 +0.7
1,123,043 + Dsui_1086 0.76 +0.7
1,123,053 + Dsui_1086 0.76 -0.9
1,123,070 + Dsui_1086 0.77 +0.7
1,123,084 + Dsui_1086 0.78 -1.3
1,123,094 + Dsui_1086 0.78 +0.7
1,123,094 + Dsui_1086 0.78 -0.9
1,123,099 - Dsui_1086 0.78 +0.7
1,123,101 + Dsui_1086 0.78 +0.7
1,123,101 + Dsui_1086 0.78 -1.7
1,123,109 - Dsui_1086 0.79 +0.7
1,123,115 + Dsui_1086 0.79 +0.7
1,123,148 - Dsui_1086 0.80 +0.7
1,123,234 + Dsui_1086 0.84 +0.7
1,123,283 - Dsui_1086 0.86 -0.9
1,123,283 - Dsui_1086 0.86 -1.7
1,123,291 - Dsui_1086 0.86 -0.3
1,123,354 + Dsui_1086 0.89 -2.3
1,123,362 - Dsui_1086 0.89 -1.3
1,123,362 - Dsui_1086 0.89 +0.7
1,123,374 + -0.9
1,123,374 + +0.7
1,123,374 + +0.7
1,123,382 - -1.7
1,123,386 + -2.5
1,123,394 - -0.9
1,123,396 - -1.3
1,123,424 - -1.7
1,123,494 + -0.9
1,123,502 - -0.3
1,123,580 - -0.9
1,123,597 + +0.7
1,123,605 + -1.7
1,123,605 + -1.7
1,123,605 + -1.3
1,123,610 + +0.7
1,123,613 - -0.9
1,123,613 - +0.7
1,123,618 - +0.7
1,123,618 - +0.7
1,123,618 - -1.3
1,123,666 + +0.7
1,123,678 + -0.9
1,123,686 + +0.7
1,123,695 - +0.7
1,123,696 + -0.3
1,123,738 - +1.3
1,123,757 - -1.3
1,123,757 - -0.3
1,123,762 - +0.7
1,123,810 + Dsui_1087 0.13 -2.1
1,123,817 + Dsui_1087 0.13 -0.9
1,123,817 + Dsui_1087 0.13 +0.7
1,123,817 + Dsui_1087 0.13 -1.7
1,123,817 + Dsui_1087 0.13 +1.7
1,123,825 - Dsui_1087 0.14 -0.9
1,123,825 - Dsui_1087 0.14 -0.3
1,123,973 - Dsui_1087 0.24 -0.3
1,124,002 + Dsui_1087 0.26 +0.7
1,124,027 + Dsui_1087 0.27 -1.3
1,124,035 - Dsui_1087 0.28 +0.7
1,124,081 + Dsui_1087 0.31 +0.7
1,124,081 + Dsui_1087 0.31 +0.7
1,124,086 + Dsui_1087 0.31 -1.7
1,124,086 + Dsui_1087 0.31 -1.2
1,124,089 - Dsui_1087 0.32 -0.3
1,124,089 - Dsui_1087 0.32 -1.7
1,124,091 + Dsui_1087 0.32 -0.3
1,124,091 + Dsui_1087 0.32 -0.3
1,124,091 + Dsui_1087 0.32 -0.7
1,124,099 - Dsui_1087 0.32 +0.7
1,124,172 + Dsui_1087 0.37 -2.5
1,124,217 - Dsui_1087 0.40 -0.3
1,124,217 - Dsui_1087 0.40 +0.7
1,124,237 - Dsui_1087 0.41 -0.3
1,124,268 + Dsui_1087 0.44 -0.3
1,124,275 + Dsui_1087 0.44 +0.7
1,124,297 + Dsui_1087 0.45 +0.7
1,124,334 - Dsui_1087 0.48 -0.7
1,124,408 + Dsui_1087 0.53 +0.7
1,124,408 + Dsui_1087 0.53 -1.2
1,124,416 - Dsui_1087 0.53 -0.9
1,124,416 - Dsui_1087 0.53 +0.7
1,124,416 - Dsui_1087 0.53 +0.7
1,124,486 + Dsui_1087 0.58 -2.7
1,124,494 - Dsui_1087 0.59 +0.7
1,124,494 - Dsui_1087 0.59 -2.8
1,124,503 - Dsui_1087 0.59 -0.9
1,124,545 - Dsui_1087 0.62 -0.3
1,124,545 - Dsui_1087 0.62 -0.3
1,124,561 - Dsui_1087 0.63 +0.7

Or see this region's nucleotide sequence