Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0971 and Dsui_0972 are separated by 18 nucleotides Dsui_0972 and Dsui_0973 are separated by 236 nucleotides Dsui_0973 and Dsui_0974 are separated by 85 nucleotides
Dsui_0971: Dsui_0971 - poly(R)-hydroxyalkanoic acid synthase, class I, at 996,840 to 998,669
_0971
Dsui_0972: Dsui_0972 - Zn-dependent hydrolase, glyoxylase, at 998,688 to 999,722
_0972
Dsui_0973: Dsui_0973 - putative transcriptional regulator, at 999,959 to 1,000,429
_0973
Dsui_0974: Dsui_0974 - hypothetical protein, at 1,000,515 to 1,000,979
_0974
Position (kb) 998
999
1000 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 997.821 kb on - strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.902 kb on + strand, within Dsui_0971 at 997.944 kb on - strand, within Dsui_0971 at 997.949 kb on - strand, within Dsui_0971 at 998.020 kb on - strand, within Dsui_0971 at 998.102 kb on + strand, within Dsui_0971 at 998.110 kb on - strand, within Dsui_0971 at 998.123 kb on - strand, within Dsui_0971 at 998.172 kb on - strand, within Dsui_0971 at 998.252 kb on - strand, within Dsui_0971 at 998.278 kb on + strand, within Dsui_0971 at 998.288 kb on + strand, within Dsui_0971 at 998.325 kb on - strand, within Dsui_0971 at 998.595 kb on - strand at 998.608 kb on + strand at 998.723 kb on - strand at 998.746 kb on - strand at 998.770 kb on - strand at 999.104 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.172 kb on + strand, within Dsui_0972 at 999.208 kb on - strand, within Dsui_0972 at 999.281 kb on + strand, within Dsui_0972 at 999.305 kb on + strand, within Dsui_0972 at 999.333 kb on - strand, within Dsui_0972 at 999.411 kb on - strand, within Dsui_0972 at 999.431 kb on + strand, within Dsui_0972 at 999.508 kb on - strand, within Dsui_0972 at 999.510 kb on + strand, within Dsui_0972 at 999.632 kb on - strand at 999.635 kb on + strand at 999.643 kb on - strand at 999.662 kb on + strand at 999.670 kb on - strand at 999.676 kb on - strand at 999.724 kb on + strand at 999.728 kb on + strand at 999.728 kb on + strand at 999.728 kb on + strand at 999.736 kb on - strand at 999.811 kb on + strand at 999.834 kb on - strand at 999.899 kb on + strand at 999.989 kb on + strand at 1000.006 kb on - strand, within Dsui_0973 at 1000.031 kb on - strand at 1000.046 kb on - strand, within Dsui_0973 at 1000.069 kb on + strand, within Dsui_0973 at 1000.119 kb on - strand, within Dsui_0973 at 1000.119 kb on - strand, within Dsui_0973 at 1000.172 kb on - strand, within Dsui_0973 at 1000.230 kb on - strand, within Dsui_0973 at 1000.308 kb on - strand, within Dsui_0973 at 1000.363 kb on + strand, within Dsui_0973 at 1000.383 kb on - strand at 1000.682 kb on + strand, within Dsui_0974
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 997,821 - Dsui_0971 0.54 -0.4 997,862 + Dsui_0971 0.56 +0.7 997,862 + Dsui_0971 0.56 -0.3 997,902 + Dsui_0971 0.58 -1.3 997,944 - Dsui_0971 0.60 -0.8 997,949 - Dsui_0971 0.61 -0.2 998,020 - Dsui_0971 0.64 +0.1 998,102 + Dsui_0971 0.69 -1.3 998,110 - Dsui_0971 0.69 -0.5 998,123 - Dsui_0971 0.70 -0.4 998,172 - Dsui_0971 0.73 -0.2 998,252 - Dsui_0971 0.77 -0.9 998,278 + Dsui_0971 0.79 -0.9 998,288 + Dsui_0971 0.79 -0.3 998,325 - Dsui_0971 0.81 -0.0 998,595 - -0.9 998,608 + -0.9 998,723 - -0.0 998,746 - -0.5 998,770 - -0.2 999,104 - Dsui_0972 0.40 -0.2 999,141 - Dsui_0972 0.44 -0.9 999,141 - Dsui_0972 0.44 -0.9 999,172 + Dsui_0972 0.47 -0.9 999,208 - Dsui_0972 0.50 -1.1 999,281 + Dsui_0972 0.57 +0.7 999,305 + Dsui_0972 0.60 -0.9 999,333 - Dsui_0972 0.62 -0.3 999,411 - Dsui_0972 0.70 -0.3 999,431 + Dsui_0972 0.72 +0.7 999,508 - Dsui_0972 0.79 -1.3 999,510 + Dsui_0972 0.79 -0.3 999,632 - +0.7 999,635 + +0.7 999,643 - +2.3 999,662 + +0.7 999,670 - -0.3 999,676 - -0.3 999,724 + -1.6 999,728 + -1.3 999,728 + +0.7 999,728 + -0.3 999,736 - -1.9 999,811 + -2.9 999,834 - +0.7 999,899 + +0.7 999,989 + -0.2 1,000,006 - Dsui_0973 0.10 -0.3 1,000,031 - +0.7 1,000,046 - Dsui_0973 0.18 -1.6 1,000,069 + Dsui_0973 0.23 -0.5 1,000,119 - Dsui_0973 0.34 +0.7 1,000,119 - Dsui_0973 0.34 -1.3 1,000,172 - Dsui_0973 0.45 +0.7 1,000,230 - Dsui_0973 0.58 -1.3 1,000,308 - Dsui_0973 0.74 -0.9 1,000,363 + Dsui_0973 0.86 -0.2 1,000,383 - +0.7 1,000,682 + Dsui_0974 0.36 -1.6
Or see this region's nucleotide sequence