Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0943 and Dsui_0944 are separated by 44 nucleotides Dsui_0944 and Dsui_0945 are separated by 156 nucleotides Dsui_0945 and Dsui_0946 are separated by 10 nucleotides Dsui_0946 and Dsui_0947 are separated by 5 nucleotides Dsui_0947 and Dsui_0948 are separated by 5 nucleotides
Dsui_0943: Dsui_0943 - nitrogenase cofactor biosynthesis protein NifB, at 971,700 to 973,223
_0943
Dsui_0944: Dsui_0944 - putative NADH:ubiquinone oxidoreductase, subunit RnfB, at 973,268 to 973,483
_0944
Dsui_0945: Dsui_0945 - Iron-sulfur cluster assembly accessory protein, at 973,640 to 974,056
_0945
Dsui_0946: Dsui_0946 - putative nitrogen fixation protein FixT, at 974,067 to 974,561
_0946
Dsui_0947: Dsui_0947 - hypothetical protein, at 974,567 to 975,425
_0947
Dsui_0948: Dsui_0948 - hypothetical protein, at 975,431 to 975,850
_0948
Position (kb)
974
975 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 973.125 kb on + strand at 973.148 kb on + strand at 973.148 kb on + strand at 973.171 kb on + strand at 973.179 kb on - strand at 973.227 kb on - strand at 973.255 kb on - strand at 973.373 kb on + strand, within Dsui_0944 at 973.417 kb on + strand, within Dsui_0944 at 973.536 kb on + strand at 973.556 kb on - strand at 973.580 kb on - strand at 973.588 kb on + strand at 973.588 kb on + strand at 973.596 kb on + strand at 973.816 kb on + strand, within Dsui_0945 at 973.864 kb on + strand, within Dsui_0945 at 973.907 kb on - strand, within Dsui_0945 at 974.081 kb on - strand at 974.207 kb on - strand, within Dsui_0946 at 974.265 kb on + strand, within Dsui_0946 at 974.340 kb on - strand, within Dsui_0946 at 974.340 kb on - strand at 974.523 kb on - strand at 974.647 kb on + strand at 974.694 kb on - strand, within Dsui_0947 at 974.771 kb on + strand, within Dsui_0947 at 974.877 kb on + strand, within Dsui_0947 at 974.959 kb on + strand, within Dsui_0947 at 975.083 kb on - strand, within Dsui_0947 at 975.355 kb on - strand at 975.410 kb on - strand at 975.468 kb on + strand at 975.543 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 973,125 + +0.8 973,148 + +0.8 973,148 + -0.8 973,171 + +0.8 973,179 - -0.8 973,227 - -0.8 973,255 - -0.8 973,373 + Dsui_0944 0.49 -0.2 973,417 + Dsui_0944 0.69 -0.2 973,536 + -0.8 973,556 - -0.8 973,580 - -1.2 973,588 + -0.2 973,588 + +0.8 973,596 + -0.2 973,816 + Dsui_0945 0.42 +0.8 973,864 + Dsui_0945 0.54 -2.9 973,907 - Dsui_0945 0.64 -0.8 974,081 - -1.8 974,207 - Dsui_0946 0.28 -0.2 974,265 + Dsui_0946 0.40 -2.4 974,340 - Dsui_0946 0.55 -0.2 974,340 - +0.8 974,523 - -0.2 974,647 + -0.2 974,694 - Dsui_0947 0.15 -0.8 974,771 + Dsui_0947 0.24 -0.8 974,877 + Dsui_0947 0.36 -0.2 974,959 + Dsui_0947 0.46 +0.8 975,083 - Dsui_0947 0.60 -0.8 975,355 - +0.8 975,410 - -1.2 975,468 + -0.8 975,543 + +0.8
Or see this region's nucleotide sequence