Strain Fitness in Dechlorosoma suillum PS around Dsui_0794

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0792 and Dsui_0793 are separated by 22 nucleotidesDsui_0793 and Dsui_0794 are separated by 49 nucleotidesDsui_0794 and Dsui_0795 are separated by 20 nucleotidesDsui_0795 and Dsui_0796 are separated by 76 nucleotidesDsui_0796 and Dsui_0797 are separated by 9 nucleotides Dsui_0792: Dsui_0792 - hypothetical protein, at 799,492 to 799,980 _0792 Dsui_0793: Dsui_0793 - N-acetylmuramoyl-L-alanine amidase, at 800,003 to 800,746 _0793 Dsui_0794: Dsui_0794 - putative protease with the C-terminal PDZ domain, at 800,796 to 802,634 _0794 Dsui_0795: Dsui_0795 - putative enzyme of the cupin superfamily, at 802,655 to 803,020 _0795 Dsui_0796: Dsui_0796 - hypothetical protein, at 803,097 to 803,474 _0796 Dsui_0797: Dsui_0797 - protein of unknown function (DUF1840), at 803,484 to 803,816 _0797 Position (kb) 800 801 802 803Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 799.854 kb on - strand, within Dsui_0792at 799.894 kb on + strand, within Dsui_0792at 799.895 kb on - strand, within Dsui_0792at 799.989 kb on + strandat 800.051 kb on - strandat 800.170 kb on + strand, within Dsui_0793at 800.245 kb on - strand, within Dsui_0793at 800.245 kb on - strand, within Dsui_0793at 800.309 kb on + strand, within Dsui_0793at 800.357 kb on - strand, within Dsui_0793at 800.394 kb on + strand, within Dsui_0793at 800.399 kb on + strand, within Dsui_0793at 800.407 kb on - strand, within Dsui_0793at 800.412 kb on - strand, within Dsui_0793at 800.449 kb on - strand, within Dsui_0793at 800.499 kb on + strand, within Dsui_0793at 800.555 kb on + strand, within Dsui_0793at 800.556 kb on - strand, within Dsui_0793at 800.562 kb on - strand, within Dsui_0793at 800.591 kb on - strand, within Dsui_0793at 800.601 kb on - strand, within Dsui_0793at 800.783 kb on - strandat 800.783 kb on - strandat 800.873 kb on + strandat 800.880 kb on + strandat 800.890 kb on + strandat 800.899 kb on + strandat 800.919 kb on + strandat 800.920 kb on + strandat 800.928 kb on - strandat 800.930 kb on + strandat 800.943 kb on + strandat 800.951 kb on - strandat 800.951 kb on - strandat 800.993 kb on + strand, within Dsui_0794at 801.027 kb on - strand, within Dsui_0794at 801.046 kb on - strand, within Dsui_0794at 801.103 kb on - strand, within Dsui_0794at 801.103 kb on - strand, within Dsui_0794at 801.129 kb on + strand, within Dsui_0794at 801.193 kb on - strand, within Dsui_0794at 801.225 kb on + strand, within Dsui_0794at 801.244 kb on - strandat 801.244 kb on - strand, within Dsui_0794at 801.323 kb on - strand, within Dsui_0794at 801.325 kb on - strand, within Dsui_0794at 801.445 kb on + strand, within Dsui_0794at 801.456 kb on + strand, within Dsui_0794at 801.458 kb on + strand, within Dsui_0794at 801.458 kb on - strandat 801.458 kb on - strand, within Dsui_0794at 801.580 kb on + strandat 801.603 kb on + strand, within Dsui_0794at 801.603 kb on + strand, within Dsui_0794at 801.611 kb on - strand, within Dsui_0794at 801.613 kb on + strand, within Dsui_0794at 801.616 kb on - strand, within Dsui_0794at 801.762 kb on - strand, within Dsui_0794at 801.773 kb on + strandat 801.774 kb on + strand, within Dsui_0794at 801.781 kb on + strand, within Dsui_0794at 801.796 kb on - strand, within Dsui_0794at 801.849 kb on + strand, within Dsui_0794at 801.859 kb on + strand, within Dsui_0794at 801.909 kb on + strand, within Dsui_0794at 801.909 kb on + strand, within Dsui_0794at 801.924 kb on + strand, within Dsui_0794at 801.929 kb on - strand, within Dsui_0794at 802.080 kb on + strand, within Dsui_0794at 802.081 kb on + strand, within Dsui_0794at 802.098 kb on - strandat 802.151 kb on + strand, within Dsui_0794at 802.280 kb on + strand, within Dsui_0794at 802.283 kb on - strand, within Dsui_0794at 802.317 kb on + strandat 802.322 kb on + strand, within Dsui_0794at 802.391 kb on + strand, within Dsui_0794at 802.431 kb on + strandat 802.434 kb on - strand, within Dsui_0794at 802.486 kb on + strandat 802.520 kb on + strandat 802.528 kb on - strandat 802.539 kb on - strandat 802.571 kb on - strandat 802.712 kb on - strand, within Dsui_0795at 802.727 kb on - strand, within Dsui_0795at 802.737 kb on - strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.758 kb on + strand, within Dsui_0795at 802.766 kb on - strand, within Dsui_0795at 802.766 kb on - strand, within Dsui_0795at 802.817 kb on - strandat 802.896 kb on + strand, within Dsui_0795at 802.959 kb on + strand, within Dsui_0795at 802.967 kb on - strand, within Dsui_0795at 803.011 kb on + strandat 803.096 kb on - strandat 803.129 kb on + strandat 803.129 kb on + strandat 803.129 kb on + strandat 803.133 kb on - strandat 803.142 kb on + strand, within Dsui_0796at 803.314 kb on + strand, within Dsui_0796at 803.314 kb on + strand, within Dsui_0796at 803.322 kb on - strand, within Dsui_0796at 803.334 kb on + strand, within Dsui_0796at 803.478 kb on - strandat 803.478 kb on - strandat 803.483 kb on - strandat 803.518 kb on - strandat 803.573 kb on - strand, within Dsui_0797at 803.622 kb on - strand, within Dsui_0797

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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799,854 - Dsui_0792 0.74 +0.8
799,894 + Dsui_0792 0.82 -1.2
799,895 - Dsui_0792 0.82 -3.4
799,989 + +0.8
800,051 - -0.1
800,170 + Dsui_0793 0.22 -0.8
800,245 - Dsui_0793 0.33 +0.8
800,245 - Dsui_0793 0.33 -1.2
800,309 + Dsui_0793 0.41 -0.2
800,357 - Dsui_0793 0.48 -2.2
800,394 + Dsui_0793 0.53 -0.2
800,399 + Dsui_0793 0.53 +0.8
800,407 - Dsui_0793 0.54 -0.1
800,412 - Dsui_0793 0.55 +0.1
800,449 - Dsui_0793 0.60 -0.9
800,499 + Dsui_0793 0.67 -0.2
800,555 + Dsui_0793 0.74 -0.8
800,556 - Dsui_0793 0.74 -2.0
800,562 - Dsui_0793 0.75 -1.2
800,591 - Dsui_0793 0.79 -0.8
800,601 - Dsui_0793 0.80 +0.2
800,783 - +0.1
800,783 - -0.5
800,873 + +0.1
800,880 + -1.1
800,890 + +1.3
800,899 + +0.1
800,919 + -2.5
800,920 + -2.2
800,928 - +0.8
800,930 + -1.1
800,943 + -0.0
800,951 - +0.8
800,951 - -2.0
800,993 + Dsui_0794 0.11 -0.2
801,027 - Dsui_0794 0.13 +0.8
801,046 - Dsui_0794 0.14 -0.8
801,103 - Dsui_0794 0.17 -0.2
801,103 - Dsui_0794 0.17 -0.2
801,129 + Dsui_0794 0.18 -0.2
801,193 - Dsui_0794 0.22 -2.0
801,225 + Dsui_0794 0.23 -0.8
801,244 - -0.2
801,244 - Dsui_0794 0.24 -0.2
801,323 - Dsui_0794 0.29 -2.2
801,325 - Dsui_0794 0.29 -0.2
801,445 + Dsui_0794 0.35 +0.5
801,456 + Dsui_0794 0.36 -0.5
801,458 + Dsui_0794 0.36 -1.0
801,458 - -0.2
801,458 - Dsui_0794 0.36 +0.8
801,580 + +0.2
801,603 + Dsui_0794 0.44 +0.8
801,603 + Dsui_0794 0.44 -1.8
801,611 - Dsui_0794 0.44 +0.8
801,613 + Dsui_0794 0.44 -0.8
801,616 - Dsui_0794 0.45 +0.8
801,762 - Dsui_0794 0.53 -1.2
801,773 + +0.8
801,774 + Dsui_0794 0.53 -0.2
801,781 + Dsui_0794 0.54 -0.5
801,796 - Dsui_0794 0.54 -0.8
801,849 + Dsui_0794 0.57 +0.4
801,859 + Dsui_0794 0.58 +1.8
801,909 + Dsui_0794 0.61 -0.4
801,909 + Dsui_0794 0.61 -2.4
801,924 + Dsui_0794 0.61 -2.4
801,929 - Dsui_0794 0.62 -2.7
802,080 + Dsui_0794 0.70 -0.3
802,081 + Dsui_0794 0.70 -1.5
802,098 - +0.8
802,151 + Dsui_0794 0.74 -0.1
802,280 + Dsui_0794 0.81 -0.1
802,283 - Dsui_0794 0.81 -2.3
802,317 + +0.2
802,322 + Dsui_0794 0.83 -0.4
802,391 + Dsui_0794 0.87 -0.6
802,431 + -0.2
802,434 - Dsui_0794 0.89 -2.7
802,486 + -0.2
802,520 + -1.0
802,528 - -0.2
802,539 - -2.0
802,571 - +0.8
802,712 - Dsui_0795 0.16 +0.8
802,727 - Dsui_0795 0.20 -1.5
802,737 - Dsui_0795 0.22 -0.2
802,758 + Dsui_0795 0.28 -1.7
802,758 + Dsui_0795 0.28 -0.5
802,758 + Dsui_0795 0.28 -0.7
802,766 - Dsui_0795 0.30 -1.5
802,766 - Dsui_0795 0.30 -2.5
802,817 - +0.8
802,896 + Dsui_0795 0.66 +0.8
802,959 + Dsui_0795 0.83 +0.4
802,967 - Dsui_0795 0.85 -1.2
803,011 + -1.5
803,096 - -0.2
803,129 + +0.1
803,129 + -0.2
803,129 + -0.2
803,133 - -0.4
803,142 + Dsui_0796 0.12 -0.1
803,314 + Dsui_0796 0.57 +0.1
803,314 + Dsui_0796 0.57 +1.9
803,322 - Dsui_0796 0.60 -0.8
803,334 + Dsui_0796 0.63 -0.6
803,478 - -0.5
803,478 - +0.1
803,483 - -0.9
803,518 - +2.1
803,573 - Dsui_0797 0.27 -0.4
803,622 - Dsui_0797 0.41 -0.7

Or see this region's nucleotide sequence