Strain Fitness in Dechlorosoma suillum PS around Dsui_0754

Experiment: ALP with Dimethyl Sulfoxide 2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0753 and Dsui_0754 are separated by 130 nucleotidesDsui_0754 and Dsui_0755 are separated by 133 nucleotidesDsui_0755 and Dsui_0756 are separated by 142 nucleotides Dsui_0753: Dsui_0753 - ATPase component of ABC transporters with duplicated ATPase domain, at 752,234 to 753,850 _0753 Dsui_0754: Dsui_0754 - hypothetical protein, at 753,981 to 754,355 _0754 Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103 _0755 Dsui_0756: Dsui_0756 - hypothetical protein, at 755,246 to 755,941 _0756 Position (kb) 753 754 755Strain fitness (log2 ratio) -2 -1 0 1 2at 753.012 kb on - strand, within Dsui_0753at 753.132 kb on + strand, within Dsui_0753at 753.211 kb on + strand, within Dsui_0753at 753.259 kb on - strand, within Dsui_0753at 753.385 kb on + strand, within Dsui_0753at 753.559 kb on - strand, within Dsui_0753at 753.559 kb on - strand, within Dsui_0753at 753.693 kb on - strandat 753.703 kb on - strandat 753.704 kb on - strandat 753.714 kb on - strandat 753.727 kb on - strandat 754.005 kb on - strandat 754.016 kb on + strandat 754.030 kb on + strand, within Dsui_0754at 754.030 kb on + strand, within Dsui_0754at 754.036 kb on + strand, within Dsui_0754at 754.084 kb on + strand, within Dsui_0754at 754.084 kb on + strand, within Dsui_0754at 754.085 kb on - strandat 754.100 kb on - strand, within Dsui_0754at 754.100 kb on - strand, within Dsui_0754at 754.122 kb on - strand, within Dsui_0754at 754.185 kb on - strand, within Dsui_0754at 754.226 kb on + strand, within Dsui_0754at 754.272 kb on + strand, within Dsui_0754at 754.346 kb on + strandat 754.365 kb on - strandat 754.421 kb on + strandat 754.438 kb on - strandat 754.458 kb on - strandat 754.492 kb on + strandat 754.493 kb on - strandat 754.500 kb on - strandat 754.500 kb on - strandat 754.549 kb on + strandat 754.549 kb on + strandat 754.583 kb on + strand, within Dsui_0755at 754.583 kb on + strand, within Dsui_0755at 754.589 kb on - strand, within Dsui_0755at 754.589 kb on - strand, within Dsui_0755at 754.591 kb on - strand, within Dsui_0755at 754.591 kb on - strand, within Dsui_0755at 754.602 kb on - strand, within Dsui_0755at 754.638 kb on + strand, within Dsui_0755at 754.648 kb on + strand, within Dsui_0755at 754.655 kb on + strand, within Dsui_0755at 754.655 kb on + strand, within Dsui_0755at 754.663 kb on - strand, within Dsui_0755at 754.781 kb on + strand, within Dsui_0755at 754.789 kb on - strand, within Dsui_0755at 754.832 kb on + strand, within Dsui_0755at 754.832 kb on + strand, within Dsui_0755at 754.840 kb on - strand, within Dsui_0755at 754.840 kb on - strand, within Dsui_0755at 754.857 kb on + strand, within Dsui_0755at 754.936 kb on - strand, within Dsui_0755at 754.938 kb on + strand, within Dsui_0755at 755.007 kb on - strand, within Dsui_0755at 755.080 kb on + strandat 755.098 kb on + strandat 755.098 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.103 kb on + strandat 755.188 kb on + strandat 755.204 kb on + strandat 755.261 kb on - strandat 755.276 kb on + strandat 755.328 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol%
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753,012 - Dsui_0753 0.48 -1.6
753,132 + Dsui_0753 0.56 -0.3
753,211 + Dsui_0753 0.60 -0.4
753,259 - Dsui_0753 0.63 -0.2
753,385 + Dsui_0753 0.71 +0.0
753,559 - Dsui_0753 0.82 +0.8
753,559 - Dsui_0753 0.82 -1.4
753,693 - -1.8
753,703 - -0.2
753,704 - +0.8
753,714 - -0.2
753,727 - -1.2
754,005 - -0.4
754,016 + -1.6
754,030 + Dsui_0754 0.13 +0.8
754,030 + Dsui_0754 0.13 -2.4
754,036 + Dsui_0754 0.15 -1.2
754,084 + Dsui_0754 0.27 -1.6
754,084 + Dsui_0754 0.27 +1.8
754,085 - +0.8
754,100 - Dsui_0754 0.32 -0.8
754,100 - Dsui_0754 0.32 +0.3
754,122 - Dsui_0754 0.38 -0.5
754,185 - Dsui_0754 0.54 -1.1
754,226 + Dsui_0754 0.65 -1.2
754,272 + Dsui_0754 0.78 +0.8
754,346 + -0.8
754,365 - -1.2
754,421 + +0.0
754,438 - -1.9
754,458 - -0.8
754,492 + +0.8
754,493 - -1.8
754,500 - -0.5
754,500 - -0.2
754,549 + -0.2
754,549 + -1.4
754,583 + Dsui_0755 0.15 +0.8
754,583 + Dsui_0755 0.15 +0.8
754,589 - Dsui_0755 0.16 +0.2
754,589 - Dsui_0755 0.16 -0.1
754,591 - Dsui_0755 0.17 +0.4
754,591 - Dsui_0755 0.17 -0.6
754,602 - Dsui_0755 0.18 -1.8
754,638 + Dsui_0755 0.24 -1.6
754,648 + Dsui_0755 0.26 -0.2
754,655 + Dsui_0755 0.27 +0.8
754,655 + Dsui_0755 0.27 -2.4
754,663 - Dsui_0755 0.28 -1.2
754,781 + Dsui_0755 0.47 -0.8
754,789 - Dsui_0755 0.49 -0.2
754,832 + Dsui_0755 0.56 +0.8
754,832 + Dsui_0755 0.56 +0.8
754,840 - Dsui_0755 0.57 +0.3
754,840 - Dsui_0755 0.57 -0.1
754,857 + Dsui_0755 0.60 -1.2
754,936 - Dsui_0755 0.73 +0.3
754,938 + Dsui_0755 0.73 -1.2
755,007 - Dsui_0755 0.84 -0.1
755,080 + +0.8
755,098 + +0.8
755,098 + -0.2
755,103 + -0.8
755,103 + +0.8
755,103 + +0.8
755,103 + -0.8
755,188 + +0.8
755,204 + -1.6
755,261 - -0.3
755,276 + -0.2
755,328 + +0.8

Or see this region's nucleotide sequence