Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0718 and Dsui_0719 are separated by 4 nucleotides Dsui_0719 and Dsui_0720 are separated by 60 nucleotides Dsui_0720 and Dsui_0721 are separated by 90 nucleotides
Dsui_0718: Dsui_0718 - thiol:disulfide interchange protein, at 711,147 to 712,931
_0718
Dsui_0719: Dsui_0719 - uncharacterized protein involved in tolerance to divalent cations, at 712,936 to 713,277
_0719
Dsui_0720: Dsui_0720 - ABC-2 type transporter, NodJ family, at 713,338 to 714,138
_0720
Dsui_0721: Dsui_0721 - radical SAM additional 4Fe4S-binding domain protein, at 714,229 to 715,599
_0721
Position (kb) 713
714
715 Strain fitness (log2 ratio) -1
0
1 at 712.967 kb on - strand at 713.270 kb on - strand at 713.426 kb on + strand, within Dsui_0720 at 713.482 kb on - strand, within Dsui_0720 at 713.509 kb on + strand, within Dsui_0720 at 713.517 kb on - strand, within Dsui_0720 at 713.553 kb on + strand, within Dsui_0720 at 713.577 kb on + strand, within Dsui_0720 at 713.585 kb on - strand, within Dsui_0720 at 713.585 kb on - strand, within Dsui_0720 at 713.639 kb on - strand, within Dsui_0720 at 713.639 kb on - strand, within Dsui_0720 at 713.655 kb on - strand, within Dsui_0720 at 713.740 kb on + strand, within Dsui_0720 at 713.765 kb on + strand at 713.773 kb on - strand, within Dsui_0720 at 713.939 kb on - strand, within Dsui_0720 at 714.024 kb on - strand, within Dsui_0720 at 714.029 kb on + strand at 714.199 kb on - strand at 714.261 kb on + strand at 714.317 kb on - strand at 714.325 kb on + strand at 714.353 kb on + strand at 714.449 kb on + strand, within Dsui_0721 at 714.452 kb on - strand, within Dsui_0721 at 714.467 kb on - strand, within Dsui_0721 at 714.492 kb on + strand, within Dsui_0721 at 714.523 kb on - strand, within Dsui_0721 at 714.612 kb on - strand, within Dsui_0721 at 714.696 kb on + strand, within Dsui_0721 at 714.851 kb on - strand, within Dsui_0721 at 714.883 kb on + strand at 714.899 kb on + strand, within Dsui_0721 at 714.931 kb on + strand, within Dsui_0721 at 714.940 kb on - strand, within Dsui_0721 at 715.059 kb on + strand, within Dsui_0721 at 715.087 kb on - strand, within Dsui_0721
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 712,967 - -0.1 713,270 - -0.7 713,426 + Dsui_0720 0.11 +0.8 713,482 - Dsui_0720 0.18 -0.1 713,509 + Dsui_0720 0.21 -0.2 713,517 - Dsui_0720 0.22 -0.4 713,553 + Dsui_0720 0.27 -0.2 713,577 + Dsui_0720 0.30 +0.8 713,585 - Dsui_0720 0.31 +0.1 713,585 - Dsui_0720 0.31 -0.4 713,639 - Dsui_0720 0.38 +0.6 713,639 - Dsui_0720 0.38 -0.2 713,655 - Dsui_0720 0.40 -0.2 713,740 + Dsui_0720 0.50 +0.8 713,765 + +0.8 713,773 - Dsui_0720 0.54 -0.3 713,939 - Dsui_0720 0.75 -0.1 714,024 - Dsui_0720 0.86 -0.1 714,029 + +0.8 714,199 - -0.8 714,261 + -0.8 714,317 - +0.8 714,325 + +0.8 714,353 + +0.8 714,449 + Dsui_0721 0.16 -1.2 714,452 - Dsui_0721 0.16 -1.2 714,467 - Dsui_0721 0.17 -1.2 714,492 + Dsui_0721 0.19 -1.2 714,523 - Dsui_0721 0.21 -0.8 714,612 - Dsui_0721 0.28 -0.8 714,696 + Dsui_0721 0.34 +0.8 714,851 - Dsui_0721 0.45 +0.8 714,883 + -0.2 714,899 + Dsui_0721 0.49 -0.2 714,931 + Dsui_0721 0.51 -0.2 714,940 - Dsui_0721 0.52 -0.2 715,059 + Dsui_0721 0.61 +0.8 715,087 - Dsui_0721 0.63 +0.8
Or see this region's nucleotide sequence