Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0689 and Dsui_0690 are separated by 72 nucleotides Dsui_0690 and Dsui_0691 are separated by 160 nucleotides Dsui_0691 and Dsui_0692 are separated by 17 nucleotides Dsui_0692 and Dsui_0693 are separated by 82 nucleotides
Dsui_0689: Dsui_0689 - lysophospholipase, at 686,125 to 686,937
_0689
Dsui_0690: Dsui_0690 - hypothetical protein, at 687,010 to 687,204
_0690
Dsui_0691: Dsui_0691 - hypothetical protein, at 687,365 to 687,562
_0691
Dsui_0692: Dsui_0692 - hypothetical protein, at 687,580 to 688,434
_0692
Dsui_0693: Dsui_0693 - hypothetical protein, at 688,517 to 689,674
_0693
Position (kb) 687
688 Strain fitness (log2 ratio) -2
-1
0
1 at 686.435 kb on - strand, within Dsui_0689 at 686.446 kb on + strand, within Dsui_0689 at 686.485 kb on + strand, within Dsui_0689 at 686.559 kb on + strand, within Dsui_0689 at 686.588 kb on - strand, within Dsui_0689 at 686.797 kb on + strand, within Dsui_0689 at 686.905 kb on + strand at 686.925 kb on - strand at 686.998 kb on + strand at 687.016 kb on - strand at 687.028 kb on - strand at 687.051 kb on + strand, within Dsui_0690 at 687.059 kb on - strand, within Dsui_0690 at 687.069 kb on - strand, within Dsui_0690 at 687.095 kb on + strand, within Dsui_0690 at 687.110 kb on + strand, within Dsui_0690 at 687.129 kb on - strand, within Dsui_0690 at 687.144 kb on + strand at 687.159 kb on - strand, within Dsui_0690 at 687.214 kb on - strand at 687.288 kb on + strand at 687.294 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.311 kb on + strand at 687.319 kb on - strand at 687.319 kb on - strand at 687.342 kb on + strand at 687.348 kb on - strand at 687.386 kb on + strand, within Dsui_0691 at 687.466 kb on + strand, within Dsui_0691 at 687.539 kb on - strand, within Dsui_0691 at 687.556 kb on + strand at 687.581 kb on - strand at 687.647 kb on + strand at 687.655 kb on - strand at 687.716 kb on - strand, within Dsui_0692 at 687.748 kb on - strand at 687.756 kb on + strand, within Dsui_0692 at 687.786 kb on + strand, within Dsui_0692 at 687.856 kb on - strand, within Dsui_0692 at 687.873 kb on - strand, within Dsui_0692 at 687.965 kb on + strand, within Dsui_0692 at 688.002 kb on + strand at 688.084 kb on + strand, within Dsui_0692 at 688.093 kb on - strand, within Dsui_0692 at 688.144 kb on + strand, within Dsui_0692 at 688.171 kb on + strand at 688.194 kb on - strand, within Dsui_0692 at 688.286 kb on + strand, within Dsui_0692 at 688.294 kb on - strand, within Dsui_0692 at 688.316 kb on + strand, within Dsui_0692 at 688.348 kb on - strand, within Dsui_0692 at 688.397 kb on - strand at 688.425 kb on - strand at 688.467 kb on + strand at 688.522 kb on + strand at 688.524 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 686,435 - Dsui_0689 0.38 -1.6 686,446 + Dsui_0689 0.39 -0.6 686,485 + Dsui_0689 0.44 -1.2 686,559 + Dsui_0689 0.53 -0.1 686,588 - Dsui_0689 0.57 +0.7 686,797 + Dsui_0689 0.83 -0.9 686,905 + -0.7 686,925 - +0.7 686,998 + -1.6 687,016 - -0.2 687,028 - -1.4 687,051 + Dsui_0690 0.21 -2.1 687,059 - Dsui_0690 0.25 -0.0 687,069 - Dsui_0690 0.30 +0.2 687,095 + Dsui_0690 0.44 -2.3 687,110 + Dsui_0690 0.51 +0.7 687,129 - Dsui_0690 0.61 -0.3 687,144 + -0.3 687,159 - Dsui_0690 0.76 -0.2 687,214 - +0.1 687,288 + -0.9 687,294 + +1.5 687,311 + -1.3 687,311 + -0.9 687,311 + -0.3 687,311 + -0.3 687,311 + -0.9 687,319 - -1.6 687,319 - -1.9 687,342 + +0.7 687,348 - +0.7 687,386 + Dsui_0691 0.11 -0.9 687,466 + Dsui_0691 0.51 +0.7 687,539 - Dsui_0691 0.88 -2.3 687,556 + +0.7 687,581 - -2.1 687,647 + +0.7 687,655 - -0.9 687,716 - Dsui_0692 0.16 +0.7 687,748 - +0.7 687,756 + Dsui_0692 0.21 -1.9 687,786 + Dsui_0692 0.24 -0.9 687,856 - Dsui_0692 0.32 -0.3 687,873 - Dsui_0692 0.34 -1.3 687,965 + Dsui_0692 0.45 -2.3 688,002 + -0.9 688,084 + Dsui_0692 0.59 +0.7 688,093 - Dsui_0692 0.60 -2.1 688,144 + Dsui_0692 0.66 -1.6 688,171 + -0.3 688,194 - Dsui_0692 0.72 +0.7 688,286 + Dsui_0692 0.83 -2.4 688,294 - Dsui_0692 0.84 -1.3 688,316 + Dsui_0692 0.86 -2.3 688,348 - Dsui_0692 0.90 +0.3 688,397 - -0.3 688,425 - -1.4 688,467 + -1.3 688,522 + -1.3 688,524 - +1.6
Or see this region's nucleotide sequence