Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0644 and Dsui_0645 are separated by 168 nucleotides Dsui_0645 and Dsui_0646 are separated by 215 nucleotides
Dsui_0644: Dsui_0644 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 637,241 to 638,917
_0644
Dsui_0645: Dsui_0645 - S-adenosylmethionine synthetase, at 639,086 to 640,249
_0645
Dsui_0646: Dsui_0646 - Lauroyl/myristoyl acyltransferase, at 640,465 to 641,355
_0646
Position (kb)
639
640
641 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 638.128 kb on + strand, within Dsui_0644 at 638.133 kb on + strand, within Dsui_0644 at 638.135 kb on - strand, within Dsui_0644 at 638.151 kb on - strand, within Dsui_0644 at 638.184 kb on - strand, within Dsui_0644 at 638.205 kb on - strand, within Dsui_0644 at 638.219 kb on - strand, within Dsui_0644 at 638.240 kb on + strand, within Dsui_0644 at 638.264 kb on - strand, within Dsui_0644 at 638.327 kb on - strand, within Dsui_0644 at 638.327 kb on - strand, within Dsui_0644 at 638.327 kb on - strand, within Dsui_0644 at 638.327 kb on - strand, within Dsui_0644 at 638.327 kb on - strand, within Dsui_0644 at 638.329 kb on + strand, within Dsui_0644 at 638.346 kb on + strand, within Dsui_0644 at 638.390 kb on + strand, within Dsui_0644 at 638.427 kb on - strand, within Dsui_0644 at 638.427 kb on - strand, within Dsui_0644 at 638.450 kb on + strand, within Dsui_0644 at 638.531 kb on - strand, within Dsui_0644 at 638.531 kb on - strand, within Dsui_0644 at 638.531 kb on - strand, within Dsui_0644 at 638.586 kb on - strand, within Dsui_0644 at 638.600 kb on - strand, within Dsui_0644 at 638.712 kb on - strand, within Dsui_0644 at 638.770 kb on + strand at 638.785 kb on + strand at 638.880 kb on - strand at 638.913 kb on + strand at 638.913 kb on + strand at 638.922 kb on - strand at 638.964 kb on + strand at 638.983 kb on + strand at 639.055 kb on + strand at 639.065 kb on - strand at 639.110 kb on - strand at 640.265 kb on - strand at 640.304 kb on + strand at 640.304 kb on + strand at 640.306 kb on - strand at 640.307 kb on - strand at 640.307 kb on - strand at 640.354 kb on + strand at 640.359 kb on + strand at 640.362 kb on - strand at 640.362 kb on - strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.462 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 638,128 + Dsui_0644 0.53 +1.8 638,133 + Dsui_0644 0.53 -1.8 638,135 - Dsui_0644 0.53 +0.8 638,151 - Dsui_0644 0.54 -0.8 638,184 - Dsui_0644 0.56 +0.8 638,205 - Dsui_0644 0.57 +0.8 638,219 - Dsui_0644 0.58 +0.8 638,240 + Dsui_0644 0.60 -1.2 638,264 - Dsui_0644 0.61 -0.2 638,327 - Dsui_0644 0.65 +0.8 638,327 - Dsui_0644 0.65 +0.8 638,327 - Dsui_0644 0.65 -0.2 638,327 - Dsui_0644 0.65 +0.8 638,327 - Dsui_0644 0.65 -0.8 638,329 + Dsui_0644 0.65 -1.2 638,346 + Dsui_0644 0.66 +0.8 638,390 + Dsui_0644 0.69 -0.2 638,427 - Dsui_0644 0.71 -0.2 638,427 - Dsui_0644 0.71 -0.8 638,450 + Dsui_0644 0.72 -2.0 638,531 - Dsui_0644 0.77 -1.2 638,531 - Dsui_0644 0.77 -0.8 638,531 - Dsui_0644 0.77 -1.2 638,586 - Dsui_0644 0.80 +0.8 638,600 - Dsui_0644 0.81 +0.8 638,712 - Dsui_0644 0.88 +0.8 638,770 + -0.2 638,785 + -1.2 638,880 - -0.2 638,913 + -0.2 638,913 + -1.5 638,922 - -1.8 638,964 + +0.8 638,983 + -2.4 639,055 + +0.8 639,065 - -0.0 639,110 - -1.4 640,265 - -1.8 640,304 + -0.2 640,304 + -1.2 640,306 - -1.2 640,307 - -0.6 640,307 - -0.7 640,354 + -1.5 640,359 + -1.2 640,362 - -0.9 640,362 - -1.4 640,402 + -0.2 640,402 + -0.2 640,402 + -1.1 640,402 + -0.8 640,402 + -0.8 640,462 + -0.6
Or see this region's nucleotide sequence