Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0263 and Dsui_0264 are separated by 118 nucleotides Dsui_0264 and Dsui_0265 are separated by 74 nucleotides Dsui_0265 and Dsui_0266 overlap by 35 nucleotides
Dsui_0263: Dsui_0263 - cytochrome c peroxidase, at 262,796 to 263,830
_0263
Dsui_0264: Dsui_0264 - tRNA-Phe, at 263,949 to 264,024
_0264
Dsui_0265: Dsui_0265 - signal transduction histidine kinase, at 264,099 to 265,634
_0265
Dsui_0266: Dsui_0266 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 265,600 to 266,283
_0266
Position (kb) 264
265
266 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 263.250 kb on + strand, within Dsui_0263 at 263.256 kb on + strand at 263.339 kb on - strand, within Dsui_0263 at 263.388 kb on + strand, within Dsui_0263 at 263.396 kb on - strand, within Dsui_0263 at 263.451 kb on + strand, within Dsui_0263 at 263.523 kb on + strand at 263.566 kb on - strand, within Dsui_0263 at 263.665 kb on + strand, within Dsui_0263 at 263.702 kb on + strand at 263.784 kb on - strand at 263.786 kb on - strand at 263.827 kb on + strand at 263.835 kb on - strand at 263.927 kb on - strand at 264.072 kb on - strand at 264.072 kb on - strand at 264.104 kb on - strand at 264.119 kb on + strand at 264.154 kb on + strand at 264.164 kb on + strand at 264.164 kb on + strand at 264.176 kb on + strand at 264.243 kb on + strand at 264.243 kb on + strand at 264.252 kb on - strand at 264.355 kb on - strand, within Dsui_0265 at 264.364 kb on - strand, within Dsui_0265 at 264.445 kb on - strand, within Dsui_0265 at 264.466 kb on + strand, within Dsui_0265 at 264.520 kb on - strand, within Dsui_0265 at 264.554 kb on + strand, within Dsui_0265 at 264.679 kb on + strand, within Dsui_0265 at 264.718 kb on + strand, within Dsui_0265 at 264.764 kb on + strand, within Dsui_0265 at 264.813 kb on + strand, within Dsui_0265 at 264.988 kb on + strand, within Dsui_0265 at 265.028 kb on + strand, within Dsui_0265 at 265.041 kb on - strand, within Dsui_0265 at 265.079 kb on + strand, within Dsui_0265 at 265.087 kb on - strand, within Dsui_0265 at 265.104 kb on + strand, within Dsui_0265 at 265.121 kb on + strand, within Dsui_0265 at 265.205 kb on + strand, within Dsui_0265 at 265.264 kb on - strand, within Dsui_0265 at 265.413 kb on + strand at 265.464 kb on + strand, within Dsui_0265 at 265.656 kb on + strand at 265.713 kb on + strand, within Dsui_0266 at 265.713 kb on - strand, within Dsui_0266 at 265.756 kb on - strand, within Dsui_0266 at 265.882 kb on + strand, within Dsui_0266 at 265.896 kb on - strand, within Dsui_0266 at 265.933 kb on - strand, within Dsui_0266 at 265.942 kb on + strand, within Dsui_0266 at 265.986 kb on - strand, within Dsui_0266 at 266.015 kb on + strand, within Dsui_0266 at 266.015 kb on - strand, within Dsui_0266 at 266.023 kb on - strand, within Dsui_0266 at 266.048 kb on + strand, within Dsui_0266 at 266.081 kb on - strand, within Dsui_0266 at 266.132 kb on - strand, within Dsui_0266 at 266.135 kb on + strand at 266.138 kb on - strand, within Dsui_0266 at 266.224 kb on - strand at 266.287 kb on + strand at 266.297 kb on - strand at 266.328 kb on + strand at 266.328 kb on + strand at 266.336 kb on - strand at 266.361 kb on - strand at 266.362 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 263,250 + Dsui_0263 0.44 +0.8 263,256 + -0.2 263,339 - Dsui_0263 0.52 -0.4 263,388 + Dsui_0263 0.57 -0.2 263,396 - Dsui_0263 0.58 -0.1 263,451 + Dsui_0263 0.63 -0.8 263,523 + +0.8 263,566 - Dsui_0263 0.74 -1.6 263,665 + Dsui_0263 0.84 -0.8 263,702 + +0.8 263,784 - -0.2 263,786 - -0.3 263,827 + -0.8 263,835 - -0.1 263,927 - -0.0 264,072 - -0.2 264,072 - -0.2 264,104 - -0.2 264,119 + -2.0 264,154 + -0.2 264,164 + +0.8 264,164 + -1.5 264,176 + -0.2 264,243 + -2.8 264,243 + -0.2 264,252 - -0.8 264,355 - Dsui_0265 0.17 -3.0 264,364 - Dsui_0265 0.17 -0.8 264,445 - Dsui_0265 0.23 -0.2 264,466 + Dsui_0265 0.24 +0.8 264,520 - Dsui_0265 0.27 -0.2 264,554 + Dsui_0265 0.30 +0.8 264,679 + Dsui_0265 0.38 -1.2 264,718 + Dsui_0265 0.40 -0.2 264,764 + Dsui_0265 0.43 +0.8 264,813 + Dsui_0265 0.46 +0.8 264,988 + Dsui_0265 0.58 -0.8 265,028 + Dsui_0265 0.60 +0.8 265,041 - Dsui_0265 0.61 -0.5 265,079 + Dsui_0265 0.64 -2.4 265,087 - Dsui_0265 0.64 +0.8 265,104 + Dsui_0265 0.65 -0.2 265,121 + Dsui_0265 0.67 -0.2 265,205 + Dsui_0265 0.72 -0.8 265,264 - Dsui_0265 0.76 +1.8 265,413 + +0.8 265,464 + Dsui_0265 0.89 -0.2 265,656 + -0.8 265,713 + Dsui_0266 0.17 -0.2 265,713 - Dsui_0266 0.17 +0.3 265,756 - Dsui_0266 0.23 +0.2 265,882 + Dsui_0266 0.41 -0.2 265,896 - Dsui_0266 0.43 +0.2 265,933 - Dsui_0266 0.49 +0.2 265,942 + Dsui_0266 0.50 -1.8 265,986 - Dsui_0266 0.56 -1.5 266,015 + Dsui_0266 0.61 -1.5 266,015 - Dsui_0266 0.61 -0.9 266,023 - Dsui_0266 0.62 +0.6 266,048 + Dsui_0266 0.65 -0.2 266,081 - Dsui_0266 0.70 -0.2 266,132 - Dsui_0266 0.78 +0.1 266,135 + +0.8 266,138 - Dsui_0266 0.79 -0.7 266,224 - +0.2 266,287 + -2.4 266,297 - -1.6 266,328 + -0.2 266,328 + +0.8 266,336 - -0.2 266,361 - -1.2 266,362 + +0.4
Or see this region's nucleotide sequence