Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0177 and Dsui_0178 are separated by 28 nucleotides Dsui_0178 and Dsui_0179 are separated by 15 nucleotides Dsui_0179 and Dsui_0180 are separated by 1 nucleotides Dsui_0180 and Dsui_0181 are separated by 180 nucleotides
Dsui_0177: Dsui_0177 - hypothetical protein, at 180,760 to 181,641
_0177
Dsui_0178: Dsui_0178 - hypothetical protein, at 181,670 to 182,509
_0178
Dsui_0179: Dsui_0179 - hypothetical protein, at 182,525 to 182,614
_0179
Dsui_0180: Dsui_0180 - hypothetical protein, at 182,616 to 182,885
_0180
Dsui_0181: Dsui_0181 - hypothetical protein, at 183,066 to 183,296
_0181
Position (kb) 181
182
183 Strain fitness (log2 ratio) -2
-1
0
1 at 180.726 kb on - strand at 181.007 kb on - strand, within Dsui_0177 at 181.034 kb on + strand, within Dsui_0177 at 181.145 kb on - strand, within Dsui_0177 at 181.184 kb on + strand at 181.184 kb on + strand, within Dsui_0177 at 181.216 kb on + strand, within Dsui_0177 at 181.387 kb on - strand, within Dsui_0177 at 181.390 kb on + strand at 181.398 kb on - strand, within Dsui_0177 at 181.467 kb on + strand, within Dsui_0177 at 181.503 kb on + strand, within Dsui_0177 at 181.511 kb on - strand, within Dsui_0177 at 181.514 kb on + strand, within Dsui_0177 at 181.564 kb on + strand at 181.643 kb on + strand at 181.651 kb on - strand at 181.653 kb on + strand at 181.704 kb on + strand at 181.716 kb on + strand at 181.774 kb on - strand, within Dsui_0178 at 181.829 kb on - strand at 181.861 kb on + strand, within Dsui_0178 at 181.869 kb on - strand, within Dsui_0178 at 182.114 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.280 kb on + strand, within Dsui_0178 at 182.546 kb on + strand, within Dsui_0179 at 182.546 kb on + strand, within Dsui_0179 at 182.681 kb on + strand, within Dsui_0180 at 182.681 kb on + strand, within Dsui_0180 at 182.708 kb on - strand, within Dsui_0180 at 182.756 kb on - strand, within Dsui_0180 at 182.764 kb on - strand, within Dsui_0180 at 183.045 kb on + strand at 183.089 kb on - strand, within Dsui_0181 at 183.210 kb on + strand, within Dsui_0181 at 183.315 kb on + strand at 183.336 kb on + strand at 183.344 kb on - strand at 183.428 kb on - strand at 183.501 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 180,726 - -0.1 181,007 - Dsui_0177 0.28 +0.9 181,034 + Dsui_0177 0.31 -0.1 181,145 - Dsui_0177 0.44 -1.7 181,184 + +0.9 181,184 + Dsui_0177 0.48 -1.9 181,216 + Dsui_0177 0.52 -0.1 181,387 - Dsui_0177 0.71 +0.9 181,390 + +0.9 181,398 - Dsui_0177 0.72 +0.9 181,467 + Dsui_0177 0.80 -0.7 181,503 + Dsui_0177 0.84 +1.3 181,511 - Dsui_0177 0.85 +0.9 181,514 + Dsui_0177 0.85 -0.1 181,564 + -0.1 181,643 + -0.1 181,651 - +0.9 181,653 + +0.9 181,704 + +0.9 181,716 + +0.9 181,774 - Dsui_0178 0.12 -0.1 181,829 - +0.9 181,861 + Dsui_0178 0.23 -1.7 181,869 - Dsui_0178 0.24 +0.9 182,114 + Dsui_0178 0.53 -1.5 182,191 + Dsui_0178 0.62 -0.1 182,191 + Dsui_0178 0.62 +0.9 182,280 + Dsui_0178 0.73 -1.7 182,546 + Dsui_0179 0.23 -0.1 182,546 + Dsui_0179 0.23 -0.1 182,681 + Dsui_0180 0.24 +0.9 182,681 + Dsui_0180 0.24 -1.1 182,708 - Dsui_0180 0.34 -0.1 182,756 - Dsui_0180 0.52 -0.7 182,764 - Dsui_0180 0.55 +0.9 183,045 + +0.9 183,089 - Dsui_0181 0.10 -0.2 183,210 + Dsui_0181 0.62 +0.9 183,315 + +0.9 183,336 + +0.9 183,344 - +0.1 183,428 - -0.1 183,501 + -2.1
Or see this region's nucleotide sequence