Experiment: ALP with Dimethyl Sulfoxide 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0129 and Dsui_0130 are separated by 177 nucleotides Dsui_0130 and Dsui_0131 are separated by 445 nucleotides
Dsui_0129: Dsui_0129 - putative esterase of the alpha-beta hydrolase superfamily, at 127,104 to 128,285
_0129
Dsui_0130: Dsui_0130 - malic enzyme, at 128,463 to 130,739
_0130
Dsui_0131: Dsui_0131 - phosphoenolpyruvate carboxykinase (GTP), at 131,185 to 133,044
_0131
Position (kb) 128
129
130
131 Strain fitness (log2 ratio) -2
-1
0
1 at 127.474 kb on - strand, within Dsui_0129 at 127.502 kb on - strand, within Dsui_0129 at 127.570 kb on + strand at 127.578 kb on - strand, within Dsui_0129 at 127.659 kb on + strand, within Dsui_0129 at 127.659 kb on + strand at 127.667 kb on - strand, within Dsui_0129 at 127.689 kb on + strand, within Dsui_0129 at 127.689 kb on - strand, within Dsui_0129 at 127.760 kb on - strand at 127.804 kb on + strand, within Dsui_0129 at 127.828 kb on + strand, within Dsui_0129 at 127.887 kb on + strand, within Dsui_0129 at 127.899 kb on + strand, within Dsui_0129 at 128.024 kb on + strand at 128.079 kb on - strand, within Dsui_0129 at 128.118 kb on + strand at 128.247 kb on - strand at 128.560 kb on + strand at 128.615 kb on + strand at 128.620 kb on + strand at 128.665 kb on + strand at 128.671 kb on + strand at 128.706 kb on + strand, within Dsui_0130 at 128.788 kb on + strand, within Dsui_0130 at 128.798 kb on + strand at 128.863 kb on - strand, within Dsui_0130 at 128.987 kb on + strand, within Dsui_0130 at 128.987 kb on + strand, within Dsui_0130 at 129.064 kb on - strand, within Dsui_0130 at 129.065 kb on + strand, within Dsui_0130 at 129.099 kb on + strand at 129.102 kb on - strand, within Dsui_0130 at 129.128 kb on + strand, within Dsui_0130 at 129.128 kb on + strand, within Dsui_0130 at 129.136 kb on - strand, within Dsui_0130 at 129.185 kb on + strand, within Dsui_0130 at 129.234 kb on - strand, within Dsui_0130 at 129.263 kb on - strand, within Dsui_0130 at 129.278 kb on + strand at 129.287 kb on + strand at 129.421 kb on + strand, within Dsui_0130 at 129.421 kb on + strand, within Dsui_0130 at 129.429 kb on - strand, within Dsui_0130 at 129.429 kb on - strand, within Dsui_0130 at 129.429 kb on - strand, within Dsui_0130 at 129.475 kb on - strand, within Dsui_0130 at 129.541 kb on - strand, within Dsui_0130 at 129.592 kb on - strand, within Dsui_0130 at 129.629 kb on - strand, within Dsui_0130 at 129.665 kb on + strand, within Dsui_0130 at 129.665 kb on + strand, within Dsui_0130 at 129.678 kb on - strand, within Dsui_0130 at 129.799 kb on - strand, within Dsui_0130 at 129.803 kb on - strand, within Dsui_0130 at 129.841 kb on + strand, within Dsui_0130 at 129.874 kb on + strand, within Dsui_0130 at 129.874 kb on + strand, within Dsui_0130 at 129.874 kb on + strand, within Dsui_0130 at 129.886 kb on + strand, within Dsui_0130 at 129.922 kb on + strand, within Dsui_0130 at 130.069 kb on + strand, within Dsui_0130 at 130.084 kb on + strand, within Dsui_0130 at 130.100 kb on - strand, within Dsui_0130 at 130.308 kb on - strand, within Dsui_0130 at 130.311 kb on + strand, within Dsui_0130 at 130.318 kb on + strand, within Dsui_0130 at 130.326 kb on - strand, within Dsui_0130 at 130.326 kb on - strand, within Dsui_0130 at 130.342 kb on - strand, within Dsui_0130 at 130.363 kb on - strand, within Dsui_0130 at 130.380 kb on - strand, within Dsui_0130 at 130.438 kb on + strand at 130.460 kb on - strand, within Dsui_0130 at 130.461 kb on - strand, within Dsui_0130 at 130.631 kb on - strand at 130.660 kb on - strand at 130.660 kb on - strand at 130.677 kb on - strand at 130.699 kb on + strand at 130.714 kb on + strand at 130.722 kb on - strand at 130.732 kb on - strand at 130.741 kb on + strand at 130.781 kb on + strand at 130.791 kb on + strand at 130.799 kb on - strand at 130.799 kb on - strand at 130.815 kb on + strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.823 kb on - strand at 130.829 kb on - strand at 130.834 kb on + strand at 130.842 kb on - strand at 130.878 kb on + strand at 130.879 kb on + strand at 130.886 kb on - strand at 130.887 kb on - strand at 130.955 kb on + strand at 131.012 kb on - strand at 131.037 kb on - strand at 131.054 kb on + strand at 131.057 kb on - strand at 131.062 kb on - strand at 131.089 kb on + strand at 131.093 kb on + strand at 131.099 kb on + strand at 131.099 kb on + strand at 131.122 kb on + strand at 131.172 kb on - strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.175 kb on + strand at 131.183 kb on - strand at 131.183 kb on - strand at 131.183 kb on - strand at 131.199 kb on - strand at 131.201 kb on + strand at 131.201 kb on + strand at 131.211 kb on + strand at 131.211 kb on + strand at 131.229 kb on + strand at 131.236 kb on + strand at 131.247 kb on + strand at 131.273 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.277 kb on + strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.285 kb on - strand at 131.291 kb on + strand at 131.309 kb on + strand at 131.309 kb on + strand at 131.339 kb on - strand at 131.364 kb on + strand at 131.372 kb on - strand, within Dsui_0131 at 131.396 kb on - strand at 131.408 kb on + strand, within Dsui_0131 at 131.408 kb on + strand, within Dsui_0131 at 131.416 kb on - strand, within Dsui_0131 at 131.417 kb on + strand, within Dsui_0131 at 131.422 kb on + strand, within Dsui_0131 at 131.434 kb on + strand, within Dsui_0131 at 131.456 kb on + strand, within Dsui_0131 at 131.482 kb on - strand, within Dsui_0131 at 131.493 kb on - strand at 131.506 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.535 kb on + strand, within Dsui_0131 at 131.543 kb on - strand, within Dsui_0131 at 131.543 kb on - strand, within Dsui_0131 at 131.576 kb on - strand, within Dsui_0131 at 131.663 kb on + strand, within Dsui_0131 at 131.676 kb on + strand, within Dsui_0131 at 131.703 kb on - strand, within Dsui_0131 at 131.705 kb on + strand, within Dsui_0131 at 131.733 kb on + strand, within Dsui_0131
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Dimethyl Sulfoxide 2 vol% remove 127,474 - Dsui_0129 0.31 +0.9 127,502 - Dsui_0129 0.34 -1.5 127,570 + +0.9 127,578 - Dsui_0129 0.40 -2.1 127,659 + Dsui_0129 0.47 +0.9 127,659 + -0.1 127,667 - Dsui_0129 0.48 -0.1 127,689 + Dsui_0129 0.49 -1.9 127,689 - Dsui_0129 0.49 -0.1 127,760 - +0.9 127,804 + Dsui_0129 0.59 -1.1 127,828 + Dsui_0129 0.61 -1.5 127,887 + Dsui_0129 0.66 +0.9 127,899 + Dsui_0129 0.67 -1.5 128,024 + +0.9 128,079 - Dsui_0129 0.82 -0.1 128,118 + -0.1 128,247 - -0.1 128,560 + -0.1 128,615 + -0.1 128,620 + -0.1 128,665 + -0.1 128,671 + +1.4 128,706 + Dsui_0130 0.11 +0.9 128,788 + Dsui_0130 0.14 -1.5 128,798 + +0.9 128,863 - Dsui_0130 0.18 -0.2 128,987 + Dsui_0130 0.23 +0.9 128,987 + Dsui_0130 0.23 +0.9 129,064 - Dsui_0130 0.26 -0.4 129,065 + Dsui_0130 0.26 +0.9 129,099 + +0.9 129,102 - Dsui_0130 0.28 +0.3 129,128 + Dsui_0130 0.29 -0.7 129,128 + Dsui_0130 0.29 -2.5 129,136 - Dsui_0130 0.30 -0.2 129,185 + Dsui_0130 0.32 -0.7 129,234 - Dsui_0130 0.34 +0.1 129,263 - Dsui_0130 0.35 -0.2 129,278 + +0.9 129,287 + +0.9 129,421 + Dsui_0130 0.42 -1.9 129,421 + Dsui_0130 0.42 +0.9 129,429 - Dsui_0130 0.42 +0.0 129,429 - Dsui_0130 0.42 -0.7 129,429 - Dsui_0130 0.42 -0.2 129,475 - Dsui_0130 0.44 -0.1 129,541 - Dsui_0130 0.47 -0.2 129,592 - Dsui_0130 0.50 -0.0 129,629 - Dsui_0130 0.51 -0.3 129,665 + Dsui_0130 0.53 -1.5 129,665 + Dsui_0130 0.53 -1.5 129,678 - Dsui_0130 0.53 -0.3 129,799 - Dsui_0130 0.59 +0.8 129,803 - Dsui_0130 0.59 -0.1 129,841 + Dsui_0130 0.61 -0.7 129,874 + Dsui_0130 0.62 -1.5 129,874 + Dsui_0130 0.62 -0.1 129,874 + Dsui_0130 0.62 +0.9 129,886 + Dsui_0130 0.62 -0.7 129,922 + Dsui_0130 0.64 -1.5 130,069 + Dsui_0130 0.71 +0.9 130,084 + Dsui_0130 0.71 +0.9 130,100 - Dsui_0130 0.72 -0.1 130,308 - Dsui_0130 0.81 +0.2 130,311 + Dsui_0130 0.81 -0.7 130,318 + Dsui_0130 0.81 -0.1 130,326 - Dsui_0130 0.82 -0.3 130,326 - Dsui_0130 0.82 -0.4 130,342 - Dsui_0130 0.83 -0.2 130,363 - Dsui_0130 0.83 -0.3 130,380 - Dsui_0130 0.84 +0.1 130,438 + +0.9 130,460 - Dsui_0130 0.88 -0.0 130,461 - Dsui_0130 0.88 -0.1 130,631 - -0.2 130,660 - -0.4 130,660 - +0.1 130,677 - -0.1 130,699 + -2.6 130,714 + +0.9 130,722 - -0.2 130,732 - -0.6 130,741 + +0.9 130,781 + +0.9 130,791 + +0.9 130,799 - -0.1 130,799 - -0.1 130,815 + -0.1 130,823 - +0.9 130,823 - -2.6 130,823 - +0.9 130,823 - +0.9 130,829 - -0.1 130,834 + +0.3 130,842 - -1.7 130,878 + +0.0 130,879 + +0.1 130,886 - -0.1 130,887 - +0.9 130,955 + -0.1 131,012 - +0.9 131,037 - -1.9 131,054 + +0.2 131,057 - -0.7 131,062 - +0.9 131,089 + +0.1 131,093 + -0.0 131,099 + -0.0 131,099 + -0.1 131,122 + -0.2 131,172 - +0.9 131,175 + -0.0 131,175 + +0.1 131,175 + -0.6 131,175 + -0.2 131,183 - -0.1 131,183 - +0.9 131,183 - +0.9 131,199 - -1.1 131,201 + +0.2 131,201 + +0.0 131,211 + +0.4 131,211 + +0.1 131,229 + -0.0 131,236 + -0.2 131,247 + -0.9 131,273 + +0.1 131,277 + -0.2 131,277 + -0.0 131,277 + -0.2 131,277 + -0.1 131,277 + +0.0 131,277 + -0.0 131,285 - +0.9 131,285 - +0.9 131,285 - -2.1 131,285 - -0.7 131,285 - +0.9 131,285 - +0.9 131,285 - -0.1 131,291 + -0.3 131,309 + -0.3 131,309 + -0.3 131,339 - +0.9 131,364 + +0.1 131,372 - Dsui_0131 0.10 -0.1 131,396 - -0.1 131,408 + Dsui_0131 0.12 -0.1 131,408 + Dsui_0131 0.12 -0.4 131,416 - Dsui_0131 0.12 +0.9 131,417 + Dsui_0131 0.12 +0.2 131,422 + Dsui_0131 0.13 +0.0 131,434 + Dsui_0131 0.13 -0.2 131,456 + Dsui_0131 0.15 +0.2 131,482 - Dsui_0131 0.16 -0.1 131,493 - +0.9 131,506 + Dsui_0131 0.17 -0.1 131,535 + Dsui_0131 0.19 -0.1 131,535 + Dsui_0131 0.19 -0.1 131,535 + Dsui_0131 0.19 -0.0 131,535 + Dsui_0131 0.19 +0.0 131,543 - Dsui_0131 0.19 +0.9 131,543 - Dsui_0131 0.19 +0.9 131,576 - Dsui_0131 0.21 -1.1 131,663 + Dsui_0131 0.26 +0.2 131,676 + Dsui_0131 0.26 -0.3 131,703 - Dsui_0131 0.28 -0.7 131,705 + Dsui_0131 0.28 +0.2 131,733 + Dsui_0131 0.29 -0.3
Or see this region's nucleotide sequence