Experiment: 20 mM Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0298 and DvMF_0299 are separated by 331 nucleotides DvMF_0299 and DvMF_0300 are separated by 117 nucleotides
DvMF_0298: DvMF_0298 - siroheme synthase (RefSeq), at 343,371 to 344,057
_0298
DvMF_0299: DvMF_0299 - glycosyl transferase family 9 (RefSeq), at 344,389 to 345,780
_0299
DvMF_0300: DvMF_0300 - CgeB family protein (RefSeq), at 345,898 to 347,244
_0300
Position (kb) 344
345
346 Strain fitness (log2 ratio) -1
0
1 at 344.191 kb on + strand at 344.227 kb on + strand at 344.296 kb on - strand at 344.298 kb on + strand at 344.392 kb on + strand at 344.455 kb on - strand at 344.587 kb on - strand, within DvMF_0299 at 344.637 kb on + strand, within DvMF_0299 at 344.762 kb on - strand, within DvMF_0299 at 344.783 kb on - strand, within DvMF_0299 at 344.811 kb on + strand, within DvMF_0299 at 344.819 kb on - strand, within DvMF_0299 at 344.934 kb on + strand, within DvMF_0299 at 344.942 kb on - strand, within DvMF_0299 at 344.984 kb on - strand, within DvMF_0299 at 345.014 kb on + strand, within DvMF_0299 at 345.027 kb on - strand, within DvMF_0299 at 345.032 kb on - strand, within DvMF_0299 at 345.044 kb on + strand, within DvMF_0299 at 345.085 kb on + strand, within DvMF_0299 at 345.094 kb on + strand, within DvMF_0299 at 345.157 kb on + strand, within DvMF_0299 at 345.165 kb on - strand, within DvMF_0299 at 345.165 kb on - strand, within DvMF_0299 at 345.165 kb on - strand, within DvMF_0299 at 345.267 kb on - strand, within DvMF_0299 at 345.363 kb on - strand, within DvMF_0299 at 345.391 kb on + strand, within DvMF_0299 at 345.399 kb on - strand, within DvMF_0299 at 345.410 kb on + strand, within DvMF_0299 at 345.418 kb on - strand, within DvMF_0299 at 345.423 kb on + strand, within DvMF_0299 at 345.431 kb on - strand, within DvMF_0299 at 345.571 kb on - strand, within DvMF_0299 at 345.602 kb on + strand, within DvMF_0299 at 345.604 kb on + strand, within DvMF_0299 at 345.625 kb on + strand, within DvMF_0299 at 345.642 kb on + strand at 345.678 kb on - strand at 345.882 kb on + strand at 345.998 kb on + strand at 346.006 kb on + strand at 346.052 kb on - strand, within DvMF_0300 at 346.140 kb on + strand, within DvMF_0300 at 346.209 kb on - strand, within DvMF_0300 at 346.209 kb on - strand, within DvMF_0300 at 346.234 kb on + strand, within DvMF_0300 at 346.234 kb on - strand, within DvMF_0300 at 346.309 kb on + strand, within DvMF_0300 at 346.336 kb on - strand, within DvMF_0300 at 346.336 kb on - strand, within DvMF_0300 at 346.337 kb on - strand, within DvMF_0300 at 346.394 kb on - strand, within DvMF_0300 at 346.439 kb on + strand, within DvMF_0300 at 346.443 kb on + strand, within DvMF_0300 at 346.443 kb on + strand, within DvMF_0300 at 346.449 kb on + strand, within DvMF_0300 at 346.451 kb on - strand, within DvMF_0300 at 346.540 kb on - strand, within DvMF_0300 at 346.590 kb on - strand, within DvMF_0300 at 346.617 kb on - strand, within DvMF_0300 at 346.645 kb on + strand, within DvMF_0300
Per-strain Table
Position Strand Gene LocusTag Fraction 20 mM Lactate (C) remove 344,191 + +0.4 344,227 + -0.6 344,296 - +0.2 344,298 + +0.1 344,392 + +0.2 344,455 - -0.3 344,587 - DvMF_0299 0.14 -0.7 344,637 + DvMF_0299 0.18 -0.2 344,762 - DvMF_0299 0.27 -0.6 344,783 - DvMF_0299 0.28 -0.9 344,811 + DvMF_0299 0.30 -0.0 344,819 - DvMF_0299 0.31 -0.4 344,934 + DvMF_0299 0.39 -0.1 344,942 - DvMF_0299 0.40 -0.3 344,984 - DvMF_0299 0.43 -0.3 345,014 + DvMF_0299 0.45 -0.1 345,027 - DvMF_0299 0.46 -1.4 345,032 - DvMF_0299 0.46 +0.2 345,044 + DvMF_0299 0.47 -0.1 345,085 + DvMF_0299 0.50 -0.4 345,094 + DvMF_0299 0.51 -0.1 345,157 + DvMF_0299 0.55 -0.1 345,165 - DvMF_0299 0.56 -0.5 345,165 - DvMF_0299 0.56 -0.7 345,165 - DvMF_0299 0.56 -0.6 345,267 - DvMF_0299 0.63 -0.7 345,363 - DvMF_0299 0.70 -0.1 345,391 + DvMF_0299 0.72 -0.4 345,399 - DvMF_0299 0.73 -0.4 345,410 + DvMF_0299 0.73 +0.3 345,418 - DvMF_0299 0.74 -0.7 345,423 + DvMF_0299 0.74 -0.2 345,431 - DvMF_0299 0.75 +1.0 345,571 - DvMF_0299 0.85 +0.3 345,602 + DvMF_0299 0.87 +0.2 345,604 + DvMF_0299 0.87 +0.0 345,625 + DvMF_0299 0.89 -0.8 345,642 + -0.9 345,678 - -0.5 345,882 + +0.6 345,998 + -0.3 346,006 + -0.3 346,052 - DvMF_0300 0.11 +0.2 346,140 + DvMF_0300 0.18 +1.7 346,209 - DvMF_0300 0.23 +1.2 346,209 - DvMF_0300 0.23 -0.3 346,234 + DvMF_0300 0.25 -0.0 346,234 - DvMF_0300 0.25 -0.1 346,309 + DvMF_0300 0.31 +0.9 346,336 - DvMF_0300 0.33 +0.2 346,336 - DvMF_0300 0.33 -0.0 346,337 - DvMF_0300 0.33 +0.5 346,394 - DvMF_0300 0.37 -0.5 346,439 + DvMF_0300 0.40 -0.1 346,443 + DvMF_0300 0.40 +0.5 346,443 + DvMF_0300 0.40 +1.7 346,449 + DvMF_0300 0.41 +0.4 346,451 - DvMF_0300 0.41 +0.1 346,540 - DvMF_0300 0.48 -0.5 346,590 - DvMF_0300 0.51 +0.1 346,617 - DvMF_0300 0.53 -0.2 346,645 + DvMF_0300 0.55 -0.8
Or see this region's nucleotide sequence