Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3241

Experiment: BHIS with Zinc Pyrithione 0.05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Zinc Pyrithione 0.05 mM
4,136,509	-		BT3240	0.70	-1.2
4,136,554	+		BT3240	0.71	-1.8
4,136,555	-		BT3240	0.71	+2.5
4,136,555	-		BT3240	0.71	-1.7
4,136,555	-		BT3240	0.71	-0.4
4,136,555	-		BT3240	0.71	+0.9
4,136,555	-		BT3240	0.71	-1.4
4,136,598	+		BT3240	0.73	+0.9
4,136,599	-		BT3240	0.73	-0.1
4,136,604	+		BT3240	0.73	+2.1
4,136,604	+		BT3240	0.73	-0.1
4,136,622	+		BT3240	0.73	-0.6
4,136,718	+		BT3240	0.76	+3.2
4,136,755	-		BT3240	0.78	-1.0
4,136,851	-		BT3240	0.81	+0.9
4,136,857	-		BT3240	0.81	-0.7
4,136,895	+		BT3240	0.82	-2.3
4,136,958	-		BT3240	0.84	+1.9
4,136,997	+		BT3240	0.85	+1.9
4,137,008	+		BT3240	0.86	+2.2
4,137,020	-		BT3240	0.86	+2.5
4,137,057	+		BT3240	0.87	-1.6
4,137,068	-		BT3240	0.87	+0.9
4,137,085	-		BT3240	0.88	-0.4
4,137,139	-		BT3240	0.90	-0.9
4,137,190	+				-0.5
4,137,191	-				-0.8
4,137,191	-				-0.9
4,137,199	+				-0.3
4,137,199	+				+0.9
4,137,208	+				+0.4
4,137,252	+				-1.7
4,137,347	+				-0.1
4,137,443	+				-0.6
4,137,464	-				+3.5
4,137,517	+				-1.9
4,137,519	+				+0.9
4,137,520	-				-1.6
4,137,557	+				+0.1
4,137,558	-				+1.5
4,137,629	+				-0.7
4,137,630	-				-1.4
4,137,685	-		BT3241	0.12	+0.9
4,137,685	-		BT3241	0.12	+1.5
4,137,686	+		BT3241	0.12	-1.9
4,137,692	+		BT3241	0.12	-1.1
4,137,693	-		BT3241	0.12	-0.7
4,137,705	-		BT3241	0.13	-0.7
4,137,724	-		BT3241	0.14	-0.6
4,137,724	-		BT3241	0.14	-0.7
4,137,726	+		BT3241	0.14	-0.3
4,137,729	-		BT3241	0.15	+0.2
4,137,729	-		BT3241	0.15	-1.4
4,137,750	+		BT3241	0.16	+0.0
4,137,750	+		BT3241	0.16	-0.9
4,137,751	-		BT3241	0.16	+2.1
4,137,751	-		BT3241	0.16	-1.0
4,137,752	+		BT3241	0.16	+1.4
4,137,785	+		BT3241	0.18	-0.1
4,137,813	+		BT3241	0.20	-0.1
4,137,813	+		BT3241	0.20	-1.4
4,137,815	+		BT3241	0.20	+0.1
4,137,815	+		BT3241	0.20	-1.4
4,137,816	-		BT3241	0.20	+0.5
4,137,816	-		BT3241	0.20	+0.9
4,137,816	-		BT3241	0.20	+1.9
4,137,816	-		BT3241	0.20	-0.8
4,137,817	+		BT3241	0.20	-0.7
4,137,818	-		BT3241	0.20	-0.8
4,137,818	-		BT3241	0.20	+1.4
4,137,821	+		BT3241	0.21	-1.2
4,137,934	+		BT3241	0.28	-0.5
4,137,934	+		BT3241	0.28	-0.8
4,137,951	-		BT3241	0.29	-0.8
4,137,960	-		BT3241	0.30	+2.5
4,137,962	+		BT3241	0.30	-1.1
4,137,987	-		BT3241	0.31	-0.5
4,137,993	+		BT3241	0.32	-1.5
4,138,001	+		BT3241	0.32	-0.9
4,138,056	+		BT3241	0.36	-0.4
4,138,079	-		BT3241	0.37	+1.1
4,138,081	+		BT3241	0.37	-0.9
4,138,082	-		BT3241	0.37	-0.2
4,138,082	-		BT3241	0.37	+2.9
4,138,082	-		BT3241	0.37	-0.4
4,138,088	+		BT3241	0.38	-1.0
4,138,089	-		BT3241	0.38	-0.4
4,138,109	+		BT3241	0.39	+0.2
4,138,110	-		BT3241	0.39	+1.2
4,138,110	-		BT3241	0.39	-0.4
4,138,113	+		BT3241	0.39	-1.3
4,138,113	+		BT3241	0.39	-1.0
4,138,114	-		BT3241	0.39	-2.1
4,138,179	+		BT3241	0.44	+1.1
4,138,182	+		BT3241	0.44	-2.8
4,138,185	-		BT3241	0.44	-1.2
4,138,185	-		BT3241	0.44	-0.3
4,138,264	+		BT3241	0.49	+0.1
4,138,265	-		BT3241	0.49	-0.2
4,138,305	-		BT3241	0.52	-0.7
4,138,323	+		BT3241	0.53	-0.4
4,138,323	+		BT3241	0.53	+0.9
4,138,340	+		BT3241	0.54	+2.2
4,138,341	-		BT3241	0.54	-1.4
4,138,358	-		BT3241	0.55	-0.5
4,138,361	+		BT3241	0.55	+0.6
4,138,361	+		BT3241	0.55	+0.6
4,138,362	-		BT3241	0.55	+1.9
4,138,399	-		BT3241	0.58	+1.2
4,138,417	-		BT3241	0.59	-0.7
4,138,421	-		BT3241	0.59	+2.5
4,138,421	-		BT3241	0.59	+2.3
4,138,428	-		BT3241	0.60	-0.3
4,138,491	+		BT3241	0.64	+2.1
4,138,491	+		BT3241	0.64	-2.5
4,138,491	+		BT3241	0.64	-0.7
4,138,492	-		BT3241	0.64	-0.6
4,138,492	-		BT3241	0.64	-0.1
4,138,530	-		BT3241	0.66	-3.4
4,138,548	+		BT3241	0.67	+2.5
4,138,572	+		BT3241	0.69	-0.3
4,138,572	+		BT3241	0.69	+0.3
4,138,573	-		BT3241	0.69	-1.2
4,138,573	-		BT3241	0.69	-0.6
4,138,627	-		BT3241	0.72	+0.9
4,138,628	+		BT3241	0.73	-0.1
4,138,628	+		BT3241	0.73	-1.7
4,138,628	+		BT3241	0.73	+0.0
4,138,629	-		BT3241	0.73	+2.5
4,138,671	-		BT3241	0.75	-0.3
4,138,671	-		BT3241	0.75	-1.2
4,138,671	-		BT3241	0.75	+0.7
4,138,671	-		BT3241	0.75	+2.8
4,138,671	-		BT3241	0.75	-0.3
4,138,687	-		BT3241	0.76	-1.6
4,138,687	-		BT3241	0.76	-1.4
4,138,689	-		BT3241	0.76	-0.1
4,138,689	-		BT3241	0.76	-1.2
4,138,698	-		BT3241	0.77	-0.3
4,138,734	+		BT3241	0.79	+0.9
4,138,734	+		BT3241	0.79	-0.7
4,138,735	-		BT3241	0.79	-0.7
4,138,740	-		BT3241	0.80	+0.9
4,138,752	+		BT3241	0.81	+2.9
4,138,753	-		BT3241	0.81	-0.1
4,138,851	-		BT3241	0.87	+0.9
4,138,859	+		BT3241	0.87	+0.2
4,138,865	+		BT3241	0.88	-1.4
4,138,866	-		BT3241	0.88	-1.1
4,138,866	-		BT3241	0.88	-2.4
4,138,917	-				+1.9
4,138,921	-				+2.9
4,138,940	+				-0.8
4,138,948	+				-0.1
4,138,954	+				-1.7
4,138,992	-				+1.3
4,139,011	+				-1.5
4,139,069	-				-1.0
4,139,083	+				+0.4
4,139,083	+				+0.6
4,139,083	+				+0.2
4,139,087	+				-0.5
4,139,087	+				-0.7
4,139,094	+				-1.9
4,139,128	+				-1.3
4,139,188	+		BT3242	0.13	-0.7
4,139,216	-		BT3242	0.16	-1.1
4,139,216	-		BT3242	0.16	+0.9
4,139,219	+		BT3242	0.16	-0.3
4,139,221	+		BT3242	0.17	+0.9
4,139,222	-		BT3242	0.17	+0.1
4,139,222	-		BT3242	0.17	-0.1
4,139,234	-		BT3242	0.18	+0.4
4,139,234	-		BT3242	0.18	-1.9
4,139,250	-		BT3242	0.20	-1.9
4,139,255	-		BT3242	0.20	+2.5
4,139,309	-		BT3242	0.26	-1.9
4,139,333	-		BT3242	0.29	-0.6
4,139,343	+		BT3242	0.30	-1.6
4,139,343	+		BT3242	0.30	+0.1
4,139,343	+		BT3242	0.30	+0.3
4,139,343	+		BT3242	0.30	-0.8
4,139,343	+		BT3242	0.30	+0.9
4,139,344	-		BT3242	0.30	+0.9
4,139,358	-		BT3242	0.32	-0.2
4,139,358	-		BT3242	0.32	-1.1
4,139,358	-		BT3242	0.32	-0.3
4,139,359	+		BT3242	0.32	-0.4
4,139,360	-		BT3242	0.32	-1.3
4,139,393	+		BT3242	0.35	-0.2
4,139,437	+		BT3242	0.40	-0.9
4,139,437	+		BT3242	0.40	+1.9
4,139,547	-		BT3242	0.52	+1.9
4,139,581	+		BT3242	0.56	+1.2
4,139,581	+		BT3242	0.56	+0.9
4,139,582	-		BT3242	0.56	-0.7
4,139,604	-		BT3242	0.58	+0.9
4,139,604	-		BT3242	0.58	-1.2
4,139,657	+		BT3242	0.64	-0.3
4,139,661	+		BT3242	0.65	+0.3
4,139,661	+		BT3242	0.65	+0.5
4,139,773	+		BT3242	0.77	+0.1
4,139,783	+		BT3242	0.78	+1.5
4,139,783	+		BT3242	0.78	+0.1
4,139,783	+		BT3242	0.78	+0.1
4,139,783	+		BT3242	0.78	+0.9
4,139,784	-		BT3242	0.78	-1.6
4,139,784	-		BT3242	0.78	-0.1
4,139,784	-		BT3242	0.78	+1.9
4,139,784	-		BT3242	0.78	-0.6
4,139,816	-		BT3242	0.82	-0.6
4,139,852	-		BT3242	0.86	-1.4
4,139,869	+		BT3242	0.87	-0.4
4,139,874	+		BT3242	0.88	-1.6
4,139,882	+		BT3242	0.89	-0.2
4,139,906	-				-1.6
4,139,934	+				-1.2
4,139,968	-				-0.1
4,139,973	-				+0.9
4,140,036	+				+2.9