Experiment: Formate/Acetate-Sulfate (60/10-30 mM) minimal
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0691 and DVU0692 are separated by 532 nucleotides DVU0692 and narH are separated by 3 nucleotides narH and DVU0694 are separated by 12 nucleotides
DVU0691: DVU0691 - membrane protein, putative (TIGR), at 765,035 to 765,994
DVU0691
DVU0692: DVU0692 - molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR), at 766,527 to 767,786
DVU0692
DVU0693: narH - molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO), at 767,790 to 768,557
narH
DVU0694: DVU0694 - molybdopterin oxidoreductase, molybdopterin-binding subunit, putative (TIGR), at 768,570 to 770,645
DVU0694
Position (kb) 766
767
768 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 765.550 kb on - strand, within DVU0691 at 765.593 kb on - strand, within DVU0691 at 765.669 kb on - strand, within DVU0691 at 765.678 kb on + strand, within DVU0691 at 765.710 kb on + strand, within DVU0691 at 765.743 kb on - strand, within DVU0691 at 765.753 kb on - strand, within DVU0691 at 765.769 kb on - strand, within DVU0691 at 765.791 kb on + strand, within DVU0691 at 765.853 kb on - strand, within DVU0691 at 765.915 kb on + strand at 765.915 kb on + strand at 765.923 kb on - strand at 765.933 kb on + strand at 766.076 kb on + strand at 766.159 kb on + strand at 766.159 kb on + strand at 766.188 kb on + strand at 766.208 kb on + strand at 766.234 kb on - strand at 766.239 kb on - strand at 766.311 kb on + strand at 766.356 kb on - strand at 766.369 kb on + strand at 766.378 kb on - strand at 766.392 kb on - strand at 766.419 kb on - strand at 766.528 kb on + strand at 766.694 kb on - strand, within DVU0692 at 766.724 kb on - strand, within DVU0692 at 766.740 kb on + strand, within DVU0692 at 766.761 kb on - strand, within DVU0692 at 766.771 kb on - strand, within DVU0692 at 766.797 kb on + strand, within DVU0692 at 766.812 kb on - strand, within DVU0692 at 766.819 kb on + strand, within DVU0692 at 766.848 kb on - strand, within DVU0692 at 766.912 kb on + strand, within DVU0692 at 766.918 kb on - strand, within DVU0692 at 766.957 kb on + strand, within DVU0692 at 767.197 kb on + strand, within DVU0692 at 767.304 kb on + strand, within DVU0692 at 767.458 kb on - strand, within DVU0692 at 767.656 kb on + strand, within DVU0692 at 767.696 kb on - strand at 767.778 kb on - strand at 767.794 kb on + strand at 767.939 kb on + strand, within narH at 768.005 kb on + strand, within narH at 768.051 kb on + strand, within narH at 768.066 kb on - strand, within narH at 768.124 kb on - strand, within narH at 768.147 kb on + strand, within narH at 768.154 kb on + strand, within narH at 768.162 kb on - strand, within narH at 768.169 kb on + strand, within narH at 768.310 kb on + strand, within narH at 768.318 kb on - strand, within narH at 768.398 kb on + strand, within narH at 768.411 kb on - strand, within narH at 768.493 kb on - strand at 768.623 kb on - strand at 768.698 kb on + strand at 768.706 kb on - strand at 768.773 kb on - strand at 768.786 kb on - strand, within DVU0694
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/10-30 mM) minimal remove 765,550 - DVU0691 0.54 +0.5 765,593 - DVU0691 0.58 -0.5 765,669 - DVU0691 0.66 -0.1 765,678 + DVU0691 0.67 -0.4 765,710 + DVU0691 0.70 -1.1 765,743 - DVU0691 0.74 -0.4 765,753 - DVU0691 0.75 -1.7 765,769 - DVU0691 0.76 -0.1 765,791 + DVU0691 0.79 -1.4 765,853 - DVU0691 0.85 +1.5 765,915 + -0.6 765,915 + -0.1 765,923 - +0.9 765,933 + +0.3 766,076 + +0.1 766,159 + -0.4 766,159 + +0.2 766,188 + +0.9 766,208 + +0.4 766,234 - -0.3 766,239 - -0.3 766,311 + +0.9 766,356 - -0.1 766,369 + +0.2 766,378 - -1.2 766,392 - -1.4 766,419 - +1.5 766,528 + -0.9 766,694 - DVU0692 0.13 -2.0 766,724 - DVU0692 0.16 -1.9 766,740 + DVU0692 0.17 -2.8 766,761 - DVU0692 0.19 +0.9 766,771 - DVU0692 0.19 -1.2 766,797 + DVU0692 0.21 +0.9 766,812 - DVU0692 0.23 -2.5 766,819 + DVU0692 0.23 -0.9 766,848 - DVU0692 0.25 -0.7 766,912 + DVU0692 0.31 -1.7 766,918 - DVU0692 0.31 -2.4 766,957 + DVU0692 0.34 -1.4 767,197 + DVU0692 0.53 -1.1 767,304 + DVU0692 0.62 -2.4 767,458 - DVU0692 0.74 -3.2 767,656 + DVU0692 0.90 -2.8 767,696 - -0.1 767,778 - -2.2 767,794 + -1.9 767,939 + narH DVU0693 0.19 -1.9 768,005 + narH DVU0693 0.28 -2.8 768,051 + narH DVU0693 0.34 -0.7 768,066 - narH DVU0693 0.36 +0.9 768,124 - narH DVU0693 0.43 -1.9 768,147 + narH DVU0693 0.46 -0.3 768,154 + narH DVU0693 0.47 -2.3 768,162 - narH DVU0693 0.48 +0.9 768,169 + narH DVU0693 0.49 -2.7 768,310 + narH DVU0693 0.68 -1.0 768,318 - narH DVU0693 0.69 -0.1 768,398 + narH DVU0693 0.79 -1.1 768,411 - narH DVU0693 0.81 -2.3 768,493 - +1.5 768,623 - +0.9 768,698 + -0.7 768,706 - -1.7 768,773 - -1.9 768,786 - DVU0694 0.10 -4.2
Or see this region's nucleotide sequence