Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05322 and H281DRAFT_05323 are separated by 357 nucleotides H281DRAFT_05323 and H281DRAFT_05324 overlap by 4 nucleotides H281DRAFT_05324 and H281DRAFT_05325 are separated by 153 nucleotides H281DRAFT_05325 and H281DRAFT_05326 are separated by 7 nucleotides
H281DRAFT_05322: H281DRAFT_05322 - gluconolactonase (EC 3.1.1.17), at 73,610 to 74,563
_05322
H281DRAFT_05323: H281DRAFT_05323 - hypothetical protein, at 74,921 to 75,211
_05323
H281DRAFT_05324: H281DRAFT_05324 - tripartite ATP-independent transporter solute receptor, DctP family, at 75,208 to 76,203
_05324
H281DRAFT_05325: H281DRAFT_05325 - TRAP-type C4-dicarboxylate transport system, small permease component, at 76,357 to 76,827
_05325
H281DRAFT_05326: H281DRAFT_05326 - TRAP transporter, DctM subunit, at 76,835 to 78,187
_05326
Position (kb) 75
76
77 Strain fitness (log2 ratio) -1
0
1 at 74.319 kb on - strand, within H281DRAFT_05322 at 74.729 kb on - strand at 74.826 kb on + strand at 74.982 kb on - strand, within H281DRAFT_05323 at 74.982 kb on - strand, within H281DRAFT_05323 at 74.982 kb on - strand, within H281DRAFT_05323 at 75.772 kb on - strand, within H281DRAFT_05324 at 76.013 kb on - strand, within H281DRAFT_05324 at 76.859 kb on - strand at 76.928 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 74,319 - H281DRAFT_05322 0.74 -0.5 74,729 - +0.2 74,826 + -0.2 74,982 - H281DRAFT_05323 0.21 -0.1 74,982 - H281DRAFT_05323 0.21 -0.3 74,982 - H281DRAFT_05323 0.21 -0.1 75,772 - H281DRAFT_05324 0.57 -1.2 76,013 - H281DRAFT_05324 0.81 -0.7 76,859 - -1.3 76,928 + -0.3
Or see this region's nucleotide sequence