Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05072 and H281DRAFT_05073 are separated by 91 nucleotides H281DRAFT_05073 and H281DRAFT_05074 are separated by 114 nucleotides H281DRAFT_05074 and H281DRAFT_05075 are separated by 219 nucleotides H281DRAFT_05075 and H281DRAFT_05076 are separated by 1 nucleotides H281DRAFT_05076 and H281DRAFT_05077 overlap by 4 nucleotides
H281DRAFT_05072: H281DRAFT_05072 - Bacteriophytochrome (light-regulated signal transduction histidine kinase), at 11,313 to 12,995
_05072
H281DRAFT_05073: H281DRAFT_05073 - hypothetical protein, at 13,087 to 13,413
_05073
H281DRAFT_05074: H281DRAFT_05074 - protease I, at 13,528 to 14,109
_05074
H281DRAFT_05075: H281DRAFT_05075 - hypothetical protein, at 14,329 to 14,805
_05075
H281DRAFT_05076: H281DRAFT_05076 - hypothetical protein, at 14,807 to 14,938
_05076
H281DRAFT_05077: H281DRAFT_05077 - transcriptional regulator, BadM/Rrf2 family, at 14,935 to 15,390
_05077
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 12.604 kb on - strand, within H281DRAFT_05072 at 12.684 kb on + strand, within H281DRAFT_05072 at 12.870 kb on + strand at 12.870 kb on + strand at 13.098 kb on + strand at 13.098 kb on + strand at 13.445 kb on + strand at 13.445 kb on + strand at 13.446 kb on - strand at 13.446 kb on - strand at 13.446 kb on - strand at 13.446 kb on - strand at 13.468 kb on + strand at 13.469 kb on - strand at 13.469 kb on - strand at 13.469 kb on - strand at 13.539 kb on + strand at 13.830 kb on - strand, within H281DRAFT_05074 at 13.830 kb on - strand, within H281DRAFT_05074 at 13.868 kb on + strand, within H281DRAFT_05074 at 14.142 kb on + strand at 14.178 kb on + strand at 14.179 kb on - strand at 14.325 kb on - strand at 14.325 kb on - strand at 14.653 kb on - strand, within H281DRAFT_05075 at 14.653 kb on - strand, within H281DRAFT_05075 at 14.770 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 12,604 - H281DRAFT_05072 0.77 -0.4 12,684 + H281DRAFT_05072 0.81 -0.2 12,870 + -0.4 12,870 + -0.3 13,098 + -0.4 13,098 + +0.4 13,445 + -0.4 13,445 + +0.2 13,446 - +0.2 13,446 - -1.8 13,446 - -0.5 13,446 - +0.1 13,468 + +0.0 13,469 - +0.1 13,469 - -0.1 13,469 - +0.2 13,539 + -0.9 13,830 - H281DRAFT_05074 0.52 -0.2 13,830 - H281DRAFT_05074 0.52 -1.1 13,868 + H281DRAFT_05074 0.58 -0.6 14,142 + -0.2 14,178 + -0.5 14,179 - +0.8 14,325 - +0.8 14,325 - +1.3 14,653 - H281DRAFT_05075 0.68 +0.9 14,653 - H281DRAFT_05075 0.68 +1.1 14,770 + +0.3
Or see this region's nucleotide sequence