Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04639 and H281DRAFT_04640 are separated by 68 nucleotides H281DRAFT_04640 and H281DRAFT_04641 are separated by 122 nucleotides
H281DRAFT_04639: H281DRAFT_04639 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 40,060 to 41,070
_04639
H281DRAFT_04640: H281DRAFT_04640 - dimethyladenosine transferase, at 41,139 to 41,969
_04640
H281DRAFT_04641: H281DRAFT_04641 - EamA-like transporter family protein, at 42,092 to 43,018
_04641
Position (kb) 41
42 Strain fitness (log2 ratio) -1
0
1 at 40.248 kb on - strand, within H281DRAFT_04639 at 40.351 kb on + strand, within H281DRAFT_04639 at 40.351 kb on + strand, within H281DRAFT_04639 at 40.480 kb on + strand, within H281DRAFT_04639 at 40.481 kb on - strand, within H281DRAFT_04639 at 40.633 kb on - strand, within H281DRAFT_04639 at 40.884 kb on - strand at 40.898 kb on - strand, within H281DRAFT_04639 at 40.898 kb on - strand, within H281DRAFT_04639 at 41.126 kb on + strand at 41.180 kb on + strand at 41.486 kb on - strand at 41.508 kb on + strand, within H281DRAFT_04640 at 41.509 kb on - strand, within H281DRAFT_04640 at 41.665 kb on - strand, within H281DRAFT_04640 at 41.844 kb on - strand, within H281DRAFT_04640 at 41.931 kb on + strand at 41.974 kb on + strand at 42.252 kb on + strand, within H281DRAFT_04641 at 42.282 kb on + strand, within H281DRAFT_04641 at 42.282 kb on + strand, within H281DRAFT_04641 at 42.415 kb on - strand, within H281DRAFT_04641 at 42.415 kb on - strand, within H281DRAFT_04641 at 42.673 kb on + strand, within H281DRAFT_04641 at 42.674 kb on - strand, within H281DRAFT_04641
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 40,248 - H281DRAFT_04639 0.19 -0.4 40,351 + H281DRAFT_04639 0.29 -1.5 40,351 + H281DRAFT_04639 0.29 +0.3 40,480 + H281DRAFT_04639 0.42 -1.7 40,481 - H281DRAFT_04639 0.42 -0.4 40,633 - H281DRAFT_04639 0.57 +0.3 40,884 - +0.9 40,898 - H281DRAFT_04639 0.83 +0.2 40,898 - H281DRAFT_04639 0.83 +0.1 41,126 + -0.0 41,180 + +0.4 41,486 - +0.0 41,508 + H281DRAFT_04640 0.44 +0.0 41,509 - H281DRAFT_04640 0.45 -0.9 41,665 - H281DRAFT_04640 0.63 +0.4 41,844 - H281DRAFT_04640 0.85 -0.1 41,931 + +1.2 41,974 + -0.3 42,252 + H281DRAFT_04641 0.17 +0.4 42,282 + H281DRAFT_04641 0.20 +0.6 42,282 + H281DRAFT_04641 0.20 +1.1 42,415 - H281DRAFT_04641 0.35 +0.3 42,415 - H281DRAFT_04641 0.35 +0.0 42,673 + H281DRAFT_04641 0.63 +0.1 42,674 - H281DRAFT_04641 0.63 -1.6
Or see this region's nucleotide sequence