Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03923 and H281DRAFT_03924 are separated by 52 nucleotides H281DRAFT_03924 and H281DRAFT_03925 are separated by 84 nucleotides
H281DRAFT_03923: H281DRAFT_03923 - prephenate dehydrogenase (EC 1.3.1.12), at 19,560 to 20,501
_03923
H281DRAFT_03924: H281DRAFT_03924 - histidinol-phosphate aminotransferase, at 20,554 to 21,666
_03924
H281DRAFT_03925: H281DRAFT_03925 - chorismate mutase, at 21,751 to 22,833
_03925
Position (kb) 20
21
22 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 20.649 kb on - strand at 20.762 kb on - strand, within H281DRAFT_03924 at 20.766 kb on - strand, within H281DRAFT_03924 at 20.766 kb on - strand, within H281DRAFT_03924 at 20.890 kb on - strand, within H281DRAFT_03924 at 20.890 kb on - strand, within H281DRAFT_03924 at 20.890 kb on - strand, within H281DRAFT_03924 at 20.890 kb on - strand, within H281DRAFT_03924 at 21.069 kb on - strand, within H281DRAFT_03924 at 21.078 kb on - strand, within H281DRAFT_03924 at 21.157 kb on - strand, within H281DRAFT_03924 at 21.300 kb on - strand, within H281DRAFT_03924 at 21.562 kb on - strand at 21.562 kb on - strand at 21.562 kb on - strand at 21.621 kb on - strand at 21.631 kb on - strand at 21.638 kb on - strand at 21.638 kb on - strand at 21.638 kb on - strand at 21.684 kb on - strand at 21.687 kb on - strand at 21.731 kb on + strand at 21.862 kb on - strand, within H281DRAFT_03925 at 21.864 kb on - strand, within H281DRAFT_03925 at 21.864 kb on - strand, within H281DRAFT_03925 at 21.864 kb on - strand, within H281DRAFT_03925 at 21.864 kb on - strand, within H281DRAFT_03925 at 21.873 kb on - strand, within H281DRAFT_03925 at 21.928 kb on - strand, within H281DRAFT_03925 at 22.454 kb on - strand, within H281DRAFT_03925 at 22.503 kb on - strand, within H281DRAFT_03925 at 22.503 kb on - strand, within H281DRAFT_03925 at 22.527 kb on - strand, within H281DRAFT_03925 at 22.527 kb on - strand, within H281DRAFT_03925 at 22.527 kb on - strand, within H281DRAFT_03925
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 20,649 - +0.1 20,762 - H281DRAFT_03924 0.19 -0.1 20,766 - H281DRAFT_03924 0.19 +0.7 20,766 - H281DRAFT_03924 0.19 +0.9 20,890 - H281DRAFT_03924 0.30 -1.6 20,890 - H281DRAFT_03924 0.30 -3.1 20,890 - H281DRAFT_03924 0.30 +0.1 20,890 - H281DRAFT_03924 0.30 -0.1 21,069 - H281DRAFT_03924 0.46 +0.2 21,078 - H281DRAFT_03924 0.47 -0.4 21,157 - H281DRAFT_03924 0.54 +1.1 21,300 - H281DRAFT_03924 0.67 +0.2 21,562 - +0.4 21,562 - +0.0 21,562 - +0.0 21,621 - -0.2 21,631 - +0.3 21,638 - +0.4 21,638 - -0.4 21,638 - +0.8 21,684 - +0.1 21,687 - -1.3 21,731 + +0.4 21,862 - H281DRAFT_03925 0.10 -2.6 21,864 - H281DRAFT_03925 0.10 -2.1 21,864 - H281DRAFT_03925 0.10 -3.7 21,864 - H281DRAFT_03925 0.10 -0.5 21,864 - H281DRAFT_03925 0.10 -1.6 21,873 - H281DRAFT_03925 0.11 -3.7 21,928 - H281DRAFT_03925 0.16 -4.3 22,454 - H281DRAFT_03925 0.65 -2.6 22,503 - H281DRAFT_03925 0.69 -6.0 22,503 - H281DRAFT_03925 0.69 -1.9 22,527 - H281DRAFT_03925 0.72 -4.1 22,527 - H281DRAFT_03925 0.72 -2.7 22,527 - H281DRAFT_03925 0.72 -2.0
Or see this region's nucleotide sequence