Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03916 and H281DRAFT_03917 are separated by 70 nucleotides H281DRAFT_03917 and H281DRAFT_03918 overlap by 4 nucleotides H281DRAFT_03918 and H281DRAFT_03919 are separated by 0 nucleotides H281DRAFT_03919 and H281DRAFT_03920 are separated by 101 nucleotides
H281DRAFT_03916: H281DRAFT_03916 - Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain, at 13,099 to 14,274
_03916
H281DRAFT_03917: H281DRAFT_03917 - Uncharacterized integral membrane protein, at 14,345 to 14,638
_03917
H281DRAFT_03918: H281DRAFT_03918 - hypothetical protein, at 14,635 to 15,180
_03918
H281DRAFT_03919: H281DRAFT_03919 - integration host factor subunit beta, at 15,181 to 15,504
_03919
H281DRAFT_03920: H281DRAFT_03920 - SSU ribosomal protein S1P, at 15,606 to 17,339
_03920
Position (kb) 14
15 Strain fitness (log2 ratio) -1
0
1
2 at 14.323 kb on - strand at 14.558 kb on - strand, within H281DRAFT_03917 at 14.570 kb on - strand, within H281DRAFT_03917 at 14.643 kb on - strand at 14.643 kb on - strand at 14.643 kb on - strand at 14.725 kb on - strand, within H281DRAFT_03918 at 14.729 kb on + strand, within H281DRAFT_03918 at 14.836 kb on + strand, within H281DRAFT_03918 at 14.836 kb on + strand, within H281DRAFT_03918 at 14.836 kb on + strand, within H281DRAFT_03918 at 14.836 kb on + strand, within H281DRAFT_03918 at 14.836 kb on + strand, within H281DRAFT_03918 at 14.837 kb on - strand, within H281DRAFT_03918 at 14.977 kb on + strand, within H281DRAFT_03918 at 14.978 kb on - strand, within H281DRAFT_03918 at 15.001 kb on + strand, within H281DRAFT_03918 at 15.001 kb on + strand, within H281DRAFT_03918 at 15.169 kb on - strand at 15.182 kb on + strand at 15.183 kb on - strand at 15.608 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 14,323 - +0.1 14,558 - H281DRAFT_03917 0.72 +0.4 14,570 - H281DRAFT_03917 0.77 +0.9 14,643 - +0.3 14,643 - +1.8 14,643 - +0.4 14,725 - H281DRAFT_03918 0.16 +1.3 14,729 + H281DRAFT_03918 0.17 +0.5 14,836 + H281DRAFT_03918 0.37 -0.3 14,836 + H281DRAFT_03918 0.37 +1.0 14,836 + H281DRAFT_03918 0.37 +0.4 14,836 + H281DRAFT_03918 0.37 +0.2 14,836 + H281DRAFT_03918 0.37 +0.3 14,837 - H281DRAFT_03918 0.37 +0.2 14,977 + H281DRAFT_03918 0.63 +0.1 14,978 - H281DRAFT_03918 0.63 +0.0 15,001 + H281DRAFT_03918 0.67 +0.7 15,001 + H281DRAFT_03918 0.67 +0.6 15,169 - +0.5 15,182 + +0.5 15,183 - +0.4 15,608 - +0.1
Or see this region's nucleotide sequence