Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03814 and H281DRAFT_03815 are separated by 74 nucleotides H281DRAFT_03815 and H281DRAFT_03816 are separated by 58 nucleotides
H281DRAFT_03814: H281DRAFT_03814 - Sugar phosphate permease, at 336,569 to 337,900
_03814
H281DRAFT_03815: H281DRAFT_03815 - D-glucarate dehydratase, at 337,975 to 339,381
_03815
H281DRAFT_03816: H281DRAFT_03816 - 5-dehydro-4-deoxyglucarate dehydratase, at 339,440 to 340,357
_03816
Position (kb) 337
338
339
340 Strain fitness (log2 ratio) -1
0
1 at 337.069 kb on + strand, within H281DRAFT_03814 at 337.140 kb on - strand, within H281DRAFT_03814 at 337.142 kb on - strand, within H281DRAFT_03814 at 337.661 kb on + strand, within H281DRAFT_03814 at 337.662 kb on - strand, within H281DRAFT_03814 at 338.010 kb on + strand at 338.503 kb on - strand, within H281DRAFT_03815 at 338.816 kb on - strand, within H281DRAFT_03815 at 338.848 kb on + strand, within H281DRAFT_03815 at 338.967 kb on + strand, within H281DRAFT_03815 at 339.281 kb on - strand at 339.329 kb on - strand at 339.329 kb on - strand at 339.435 kb on + strand at 339.436 kb on - strand at 339.635 kb on + strand, within H281DRAFT_03816 at 339.645 kb on + strand, within H281DRAFT_03816 at 339.682 kb on - strand, within H281DRAFT_03816 at 339.782 kb on + strand, within H281DRAFT_03816 at 339.782 kb on + strand, within H281DRAFT_03816 at 339.889 kb on + strand, within H281DRAFT_03816 at 340.052 kb on + strand, within H281DRAFT_03816 at 340.053 kb on - strand, within H281DRAFT_03816 at 340.055 kb on - strand, within H281DRAFT_03816 at 340.055 kb on - strand, within H281DRAFT_03816 at 340.220 kb on + strand, within H281DRAFT_03816
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 337,069 + H281DRAFT_03814 0.38 +0.4 337,140 - H281DRAFT_03814 0.43 -0.2 337,142 - H281DRAFT_03814 0.43 -0.0 337,661 + H281DRAFT_03814 0.82 +0.2 337,662 - H281DRAFT_03814 0.82 +0.4 338,010 + -0.3 338,503 - H281DRAFT_03815 0.38 -1.0 338,816 - H281DRAFT_03815 0.60 -0.7 338,848 + H281DRAFT_03815 0.62 +0.4 338,967 + H281DRAFT_03815 0.71 -0.6 339,281 - +0.6 339,329 - +0.2 339,329 - -1.7 339,435 + +0.3 339,436 - +0.1 339,635 + H281DRAFT_03816 0.21 -0.5 339,645 + H281DRAFT_03816 0.22 +0.5 339,682 - H281DRAFT_03816 0.26 -0.8 339,782 + H281DRAFT_03816 0.37 -0.2 339,782 + H281DRAFT_03816 0.37 +0.1 339,889 + H281DRAFT_03816 0.49 +0.2 340,052 + H281DRAFT_03816 0.67 -0.7 340,053 - H281DRAFT_03816 0.67 +0.5 340,055 - H281DRAFT_03816 0.67 +0.1 340,055 - H281DRAFT_03816 0.67 -0.1 340,220 + H281DRAFT_03816 0.85 +0.8
Or see this region's nucleotide sequence