Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03004 and H281DRAFT_03005 are separated by 356 nucleotides H281DRAFT_03005 and H281DRAFT_03006 overlap by 23 nucleotides
H281DRAFT_03004: H281DRAFT_03004 - MFS transporter, MHS family, shikimate and dehydroshikimate transport protein, at 29,143 to 30,459
_03004
H281DRAFT_03005: H281DRAFT_03005 - hypothetical protein, at 30,816 to 31,034
_03005
H281DRAFT_03006: H281DRAFT_03006 - transcriptional regulator, GntR family, at 31,012 to 31,731
_03006
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-2
-1
0
1 at 29.821 kb on + strand at 29.975 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.119 kb on - strand, within H281DRAFT_03004 at 30.121 kb on + strand, within H281DRAFT_03004 at 30.169 kb on + strand, within H281DRAFT_03004 at 30.169 kb on + strand, within H281DRAFT_03004 at 30.289 kb on + strand, within H281DRAFT_03004 at 30.459 kb on + strand at 30.460 kb on - strand at 30.510 kb on + strand at 30.510 kb on + strand at 30.551 kb on + strand at 30.551 kb on + strand at 30.552 kb on - strand at 30.554 kb on + strand at 30.554 kb on + strand at 30.591 kb on - strand at 30.640 kb on + strand at 30.643 kb on - strand at 30.663 kb on - strand at 30.663 kb on - strand at 30.697 kb on + strand at 30.698 kb on - strand at 30.702 kb on + strand at 30.738 kb on + strand at 30.775 kb on - strand at 30.986 kb on + strand, within H281DRAFT_03005 at 30.986 kb on + strand, within H281DRAFT_03005 at 30.986 kb on + strand, within H281DRAFT_03005 at 30.987 kb on - strand, within H281DRAFT_03005 at 30.987 kb on - strand, within H281DRAFT_03005 at 31.064 kb on + strand at 31.064 kb on + strand at 31.105 kb on + strand, within H281DRAFT_03006 at 31.144 kb on + strand, within H281DRAFT_03006 at 31.144 kb on + strand, within H281DRAFT_03006 at 31.145 kb on - strand, within H281DRAFT_03006 at 31.282 kb on + strand, within H281DRAFT_03006 at 31.536 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.737 kb on + strand at 31.737 kb on + strand at 31.737 kb on + strand at 31.738 kb on - strand at 31.738 kb on - strand at 31.897 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 29,821 + +1.1 29,975 + H281DRAFT_03004 0.63 -0.6 30,118 + H281DRAFT_03004 0.74 +0.3 30,118 + H281DRAFT_03004 0.74 -0.1 30,118 + H281DRAFT_03004 0.74 +0.1 30,119 - H281DRAFT_03004 0.74 -0.2 30,121 + H281DRAFT_03004 0.74 -0.2 30,169 + H281DRAFT_03004 0.78 +0.1 30,169 + H281DRAFT_03004 0.78 +1.1 30,289 + H281DRAFT_03004 0.87 -0.7 30,459 + -0.7 30,460 - +0.3 30,510 + -0.3 30,510 + +0.0 30,551 + -0.1 30,551 + +0.4 30,552 - -0.9 30,554 + +0.7 30,554 + -0.5 30,591 - -0.6 30,640 + +0.0 30,643 - +0.6 30,663 - -0.1 30,663 - -0.6 30,697 + -0.2 30,698 - -0.3 30,702 + +0.5 30,738 + -0.3 30,775 - -0.7 30,986 + H281DRAFT_03005 0.78 -0.1 30,986 + H281DRAFT_03005 0.78 -0.6 30,986 + H281DRAFT_03005 0.78 +0.9 30,987 - H281DRAFT_03005 0.78 -2.2 30,987 - H281DRAFT_03005 0.78 -0.4 31,064 + -2.0 31,064 + -0.7 31,105 + H281DRAFT_03006 0.13 -1.6 31,144 + H281DRAFT_03006 0.18 -1.5 31,144 + H281DRAFT_03006 0.18 -2.1 31,145 - H281DRAFT_03006 0.18 -0.9 31,282 + H281DRAFT_03006 0.38 -0.7 31,536 + H281DRAFT_03006 0.73 -1.5 31,616 + H281DRAFT_03006 0.84 -1.3 31,616 + H281DRAFT_03006 0.84 -2.5 31,737 + -0.1 31,737 + -0.5 31,737 + -0.3 31,738 - +0.6 31,738 - -0.2 31,897 + +0.9
Or see this region's nucleotide sequence