Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02980 and H281DRAFT_02981 are separated by 190 nucleotides H281DRAFT_02981 and H281DRAFT_02982 are separated by 25 nucleotides
H281DRAFT_02980: H281DRAFT_02980 - Citrate synthase, at 1 to 597
_02980
H281DRAFT_02981: H281DRAFT_02981 - aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming), at 788 to 3,385
_02981
H281DRAFT_02982: H281DRAFT_02982 - 2-methylaconitate cis-trans isomerase, at 3,411 to 4,592
_02982
Position (kb)
0
1
2
3
4 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 0.548 kb on - strand at 0.679 kb on + strand at 0.680 kb on - strand at 0.684 kb on + strand at 0.685 kb on - strand at 0.769 kb on + strand at 0.794 kb on - strand at 1.020 kb on + strand at 1.020 kb on + strand at 1.478 kb on + strand, within H281DRAFT_02981 at 1.481 kb on - strand, within H281DRAFT_02981 at 1.520 kb on - strand, within H281DRAFT_02981 at 1.537 kb on + strand, within H281DRAFT_02981 at 1.601 kb on + strand, within H281DRAFT_02981 at 1.601 kb on + strand, within H281DRAFT_02981 at 1.703 kb on + strand, within H281DRAFT_02981 at 1.704 kb on - strand, within H281DRAFT_02981 at 1.827 kb on - strand, within H281DRAFT_02981 at 2.195 kb on + strand, within H281DRAFT_02981 at 2.273 kb on + strand, within H281DRAFT_02981 at 2.273 kb on + strand, within H281DRAFT_02981 at 2.273 kb on + strand, within H281DRAFT_02981 at 2.273 kb on + strand, within H281DRAFT_02981 at 2.440 kb on + strand, within H281DRAFT_02981 at 2.586 kb on - strand, within H281DRAFT_02981 at 2.609 kb on + strand, within H281DRAFT_02981 at 2.701 kb on + strand, within H281DRAFT_02981 at 2.702 kb on - strand, within H281DRAFT_02981 at 2.702 kb on - strand, within H281DRAFT_02981 at 2.702 kb on - strand, within H281DRAFT_02981 at 2.760 kb on - strand, within H281DRAFT_02981 at 2.968 kb on + strand, within H281DRAFT_02981 at 2.969 kb on - strand, within H281DRAFT_02981 at 2.969 kb on - strand, within H281DRAFT_02981 at 3.011 kb on + strand, within H281DRAFT_02981 at 3.447 kb on + strand at 3.448 kb on - strand at 3.636 kb on - strand, within H281DRAFT_02982 at 3.666 kb on + strand, within H281DRAFT_02982 at 3.666 kb on + strand, within H281DRAFT_02982 at 3.666 kb on + strand, within H281DRAFT_02982 at 3.666 kb on + strand, within H281DRAFT_02982 at 4.134 kb on - strand, within H281DRAFT_02982 at 4.134 kb on - strand, within H281DRAFT_02982
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 548 - +0.8 679 + +0.0 680 - +0.2 684 + -0.6 685 - -0.3 769 + +0.3 794 - -1.4 1,020 + +0.4 1,020 + -0.5 1,478 + H281DRAFT_02981 0.27 -0.5 1,481 - H281DRAFT_02981 0.27 -0.4 1,520 - H281DRAFT_02981 0.28 -0.3 1,537 + H281DRAFT_02981 0.29 +0.1 1,601 + H281DRAFT_02981 0.31 -0.3 1,601 + H281DRAFT_02981 0.31 -0.8 1,703 + H281DRAFT_02981 0.35 -1.3 1,704 - H281DRAFT_02981 0.35 -0.9 1,827 - H281DRAFT_02981 0.40 -0.8 2,195 + H281DRAFT_02981 0.54 -1.6 2,273 + H281DRAFT_02981 0.57 -0.7 2,273 + H281DRAFT_02981 0.57 -0.5 2,273 + H281DRAFT_02981 0.57 -1.6 2,273 + H281DRAFT_02981 0.57 +0.1 2,440 + H281DRAFT_02981 0.64 -0.8 2,586 - H281DRAFT_02981 0.69 -2.8 2,609 + H281DRAFT_02981 0.70 -0.4 2,701 + H281DRAFT_02981 0.74 -0.7 2,702 - H281DRAFT_02981 0.74 -0.2 2,702 - H281DRAFT_02981 0.74 -0.6 2,702 - H281DRAFT_02981 0.74 -0.0 2,760 - H281DRAFT_02981 0.76 -0.9 2,968 + H281DRAFT_02981 0.84 +0.4 2,969 - H281DRAFT_02981 0.84 -0.6 2,969 - H281DRAFT_02981 0.84 -0.7 3,011 + H281DRAFT_02981 0.86 +0.2 3,447 + -0.8 3,448 - +0.1 3,636 - H281DRAFT_02982 0.19 +1.0 3,666 + H281DRAFT_02982 0.22 -0.4 3,666 + H281DRAFT_02982 0.22 +0.2 3,666 + H281DRAFT_02982 0.22 +0.2 3,666 + H281DRAFT_02982 0.22 -1.5 4,134 - H281DRAFT_02982 0.61 -1.6 4,134 - H281DRAFT_02982 0.61 -1.8
Or see this region's nucleotide sequence