Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02224

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02223 and H281DRAFT_02224 are separated by 152 nucleotidesH281DRAFT_02224 and H281DRAFT_02225 overlap by 4 nucleotidesH281DRAFT_02225 and H281DRAFT_02226 are separated by 141 nucleotides H281DRAFT_02223: H281DRAFT_02223 - rod shape-determining protein MreB, at 367,111 to 368,154 _02223 H281DRAFT_02224: H281DRAFT_02224 - rod shape-determining protein MreC, at 368,307 to 369,413 _02224 H281DRAFT_02225: H281DRAFT_02225 - rod shape-determining protein MreD, at 369,410 to 369,922 _02225 H281DRAFT_02226: H281DRAFT_02226 - penicillin-binding protein 2, at 370,064 to 372,481 _02226 Position (kb) 368 369 370Strain fitness (log2 ratio) -1 0 1at 368.152 kb on + strandat 368.152 kb on + strandat 368.152 kb on + strandat 369.129 kb on + strand, within H281DRAFT_02224at 369.129 kb on + strand, within H281DRAFT_02224at 369.425 kb on + strandat 369.425 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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368,152 + -1.0
368,152 + -0.8
368,152 + -0.5
369,129 + H281DRAFT_02224 0.74 +0.4
369,129 + H281DRAFT_02224 0.74 +0.9
369,425 + -0.7
369,425 + -0.2

Or see this region's nucleotide sequence