Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01099 and H281DRAFT_01100 are separated by 23 nucleotides H281DRAFT_01100 and H281DRAFT_01101 are separated by 201 nucleotides H281DRAFT_01101 and H281DRAFT_01102 are separated by 62 nucleotides
H281DRAFT_01099: H281DRAFT_01099 - XapX domain-containing protein, at 1,235,325 to 1,235,630
_01099
H281DRAFT_01100: H281DRAFT_01100 - hypothetical protein, at 1,235,654 to 1,236,295
_01100
H281DRAFT_01101: H281DRAFT_01101 - Small-conductance mechanosensitive channel, at 1,236,497 to 1,237,966
_01101
H281DRAFT_01102: H281DRAFT_01102 - hypothetical protein, at 1,238,029 to 1,239,900
_01102
Position (kb)
1236
1237
1238 Strain fitness (log2 ratio)
-1
0
1 at 1235.623 kb on + strand at 1235.865 kb on + strand, within H281DRAFT_01100 at 1235.981 kb on + strand, within H281DRAFT_01100 at 1235.981 kb on + strand, within H281DRAFT_01100 at 1235.981 kb on + strand, within H281DRAFT_01100 at 1236.309 kb on + strand at 1236.887 kb on - strand, within H281DRAFT_01101 at 1237.090 kb on - strand, within H281DRAFT_01101 at 1237.830 kb on + strand at 1237.939 kb on - strand at 1238.190 kb on - strand at 1238.303 kb on - strand, within H281DRAFT_01102 at 1238.345 kb on + strand at 1238.487 kb on - strand, within H281DRAFT_01102
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,235,623 + -0.3 1,235,865 + H281DRAFT_01100 0.33 +0.7 1,235,981 + H281DRAFT_01100 0.51 +0.5 1,235,981 + H281DRAFT_01100 0.51 -0.4 1,235,981 + H281DRAFT_01100 0.51 -0.3 1,236,309 + -0.8 1,236,887 - H281DRAFT_01101 0.27 -0.5 1,237,090 - H281DRAFT_01101 0.40 -0.5 1,237,830 + -0.3 1,237,939 - +0.0 1,238,190 - +1.3 1,238,303 - H281DRAFT_01102 0.15 +0.5 1,238,345 + +0.2 1,238,487 - H281DRAFT_01102 0.24 -0.1
Or see this region's nucleotide sequence