Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00917

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00916 and H281DRAFT_00917 are separated by 126 nucleotidesH281DRAFT_00917 and H281DRAFT_00918 are separated by 24 nucleotidesH281DRAFT_00918 and H281DRAFT_00919 are separated by 139 nucleotides H281DRAFT_00916: H281DRAFT_00916 - short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase, at 1,018,817 to 1,020,901 _00916 H281DRAFT_00917: H281DRAFT_00917 - acetyl-CoA C-acetyltransferase, at 1,021,028 to 1,022,206 _00917 H281DRAFT_00918: H281DRAFT_00918 - Conserved secreted protein, at 1,022,231 to 1,022,746 _00918 H281DRAFT_00919: H281DRAFT_00919 - hypothetical protein, at 1,022,886 to 1,023,242 _00919 Position (kb) 1021 1022 1023Strain fitness (log2 ratio) -1 0 1at 1020.272 kb on + strand, within H281DRAFT_00916at 1020.272 kb on + strand, within H281DRAFT_00916at 1020.422 kb on + strand, within H281DRAFT_00916at 1020.579 kb on - strandat 1020.719 kb on + strandat 1020.720 kb on - strandat 1021.010 kb on + strandat 1021.011 kb on - strandat 1021.041 kb on + strandat 1021.048 kb on - strandat 1021.129 kb on - strandat 1021.182 kb on + strand, within H281DRAFT_00917at 1021.182 kb on + strand, within H281DRAFT_00917at 1021.182 kb on + strand, within H281DRAFT_00917at 1021.502 kb on + strand, within H281DRAFT_00917at 1021.650 kb on - strand, within H281DRAFT_00917at 1022.162 kb on - strandat 1022.162 kb on - strandat 1022.332 kb on - strand, within H281DRAFT_00918at 1022.674 kb on + strandat 1022.675 kb on - strand, within H281DRAFT_00918at 1022.784 kb on + strandat 1022.785 kb on - strandat 1022.858 kb on + strandat 1022.859 kb on - strandat 1022.865 kb on - strandat 1022.887 kb on + strandat 1022.888 kb on - strandat 1022.888 kb on - strandat 1023.021 kb on - strand, within H281DRAFT_00919

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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1,020,272 + H281DRAFT_00916 0.70 +0.4
1,020,272 + H281DRAFT_00916 0.70 +0.3
1,020,422 + H281DRAFT_00916 0.77 -0.3
1,020,579 - +1.1
1,020,719 + +0.3
1,020,720 - +0.6
1,021,010 + +0.1
1,021,011 - -0.4
1,021,041 + +0.9
1,021,048 - +0.9
1,021,129 - +0.3
1,021,182 + H281DRAFT_00917 0.13 -0.1
1,021,182 + H281DRAFT_00917 0.13 +0.6
1,021,182 + H281DRAFT_00917 0.13 +1.0
1,021,502 + H281DRAFT_00917 0.40 +0.2
1,021,650 - H281DRAFT_00917 0.53 +1.2
1,022,162 - +0.5
1,022,162 - +0.4
1,022,332 - H281DRAFT_00918 0.20 +0.2
1,022,674 + +0.3
1,022,675 - H281DRAFT_00918 0.86 +0.4
1,022,784 + -0.8
1,022,785 - -0.3
1,022,858 + -0.6
1,022,859 - -0.2
1,022,865 - +0.8
1,022,887 + -0.5
1,022,888 - -0.7
1,022,888 - -0.2
1,023,021 - H281DRAFT_00919 0.38 +0.2

Or see this region's nucleotide sequence