Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00726

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00725 and H281DRAFT_00726 overlap by 1 nucleotidesH281DRAFT_00726 and H281DRAFT_00727 overlap by 4 nucleotidesH281DRAFT_00727 and H281DRAFT_00728 are separated by 274 nucleotides H281DRAFT_00725: H281DRAFT_00725 - hypothetical protein, at 818,153 to 819,217 _00725 H281DRAFT_00726: H281DRAFT_00726 - acyl-CoA dehydrogenase, at 819,217 to 820,473 _00726 H281DRAFT_00727: H281DRAFT_00727 - acyl carrier protein, at 820,470 to 820,718 _00727 H281DRAFT_00728: H281DRAFT_00728 - Predicted N-acyltransferase, GNAT family, at 820,993 to 821,526 _00728 Position (kb) 819 820 821Strain fitness (log2 ratio) -1 0 1at 818.241 kb on - strandat 818.612 kb on + strand, within H281DRAFT_00725at 819.638 kb on + strand, within H281DRAFT_00726at 820.167 kb on - strand, within H281DRAFT_00726at 820.251 kb on - strand, within H281DRAFT_00726at 820.881 kb on + strandat 820.892 kb on + strandat 821.292 kb on - strand, within H281DRAFT_00728at 821.337 kb on - strand, within H281DRAFT_00728at 821.365 kb on + strand, within H281DRAFT_00728

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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818,241 - +0.4
818,612 + H281DRAFT_00725 0.43 -0.1
819,638 + H281DRAFT_00726 0.33 +0.5
820,167 - H281DRAFT_00726 0.76 +0.8
820,251 - H281DRAFT_00726 0.82 +0.2
820,881 + +1.0
820,892 + +0.3
821,292 - H281DRAFT_00728 0.56 -0.2
821,337 - H281DRAFT_00728 0.64 -0.4
821,365 + H281DRAFT_00728 0.70 +0.6

Or see this region's nucleotide sequence