Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00443 and H281DRAFT_00444 are separated by 113 nucleotides H281DRAFT_00444 and H281DRAFT_00445 are separated by 23 nucleotides
H281DRAFT_00443: H281DRAFT_00443 - Fe-S cluster biosynthesis and repair protein YggX, at 487,142 to 487,417
_00443
H281DRAFT_00444: H281DRAFT_00444 - N-acetylglutamate synthase, at 487,531 to 488,919
_00444
H281DRAFT_00445: H281DRAFT_00445 - ATP-dependent helicase HrpA, at 488,943 to 493,397
_00445
Position (kb) 487
488
489 Strain fitness (log2 ratio) -2
-1
0
1 at 486.684 kb on - strand at 486.798 kb on - strand at 486.874 kb on - strand at 487.039 kb on - strand at 487.482 kb on - strand at 487.497 kb on + strand at 487.498 kb on - strand at 487.518 kb on + strand at 487.518 kb on + strand at 487.575 kb on - strand at 487.802 kb on + strand, within H281DRAFT_00444 at 488.112 kb on - strand, within H281DRAFT_00444 at 488.112 kb on - strand, within H281DRAFT_00444 at 488.112 kb on - strand at 488.112 kb on - strand, within H281DRAFT_00444 at 488.930 kb on - strand at 488.930 kb on - strand at 488.930 kb on - strand at 488.930 kb on - strand at 488.931 kb on + strand at 489.479 kb on - strand, within H281DRAFT_00445 at 489.777 kb on + strand, within H281DRAFT_00445 at 489.777 kb on + strand, within H281DRAFT_00445
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 486,684 - +0.7 486,798 - +0.6 486,874 - +0.0 487,039 - +0.1 487,482 - +0.2 487,497 + -0.6 487,498 - -0.1 487,518 + -0.2 487,518 + -0.6 487,575 - -2.5 487,802 + H281DRAFT_00444 0.20 -0.5 488,112 - H281DRAFT_00444 0.42 -2.4 488,112 - H281DRAFT_00444 0.42 -2.2 488,112 - -1.2 488,112 - H281DRAFT_00444 0.42 +0.2 488,930 - -0.0 488,930 - -0.4 488,930 - +0.5 488,930 - -1.0 488,931 + -0.2 489,479 - H281DRAFT_00445 0.12 -0.0 489,777 + H281DRAFT_00445 0.19 -0.2 489,777 + H281DRAFT_00445 0.19 +0.4
Or see this region's nucleotide sequence