Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_791 and HP15_792 overlap by 4 nucleotides HP15_792 and HP15_793 are separated by 136 nucleotides HP15_793 and HP15_794 are separated by 32 nucleotides HP15_794 and HP15_795 are separated by 143 nucleotides
HP15_791: HP15_791 - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA, at 804,384 to 806,657
_791
HP15_792: HP15_792 - nucleoside triphosphate pyrophosphohydrolase, at 806,654 to 807,511
_792
HP15_793: HP15_793 - conserved hypothetical protein, at 807,648 to 807,992
_793
HP15_794: HP15_794 - conserved hypothetical protein, at 808,025 to 808,258
_794
HP15_795: HP15_795 - phosphoenolpyruvate carboxylase, at 808,402 to 811,008
_795
Position (kb) 806
807
808 Strain fitness (log2 ratio) -1
0
1
2
3 at 805.752 kb on + strand, within HP15_791 at 805.808 kb on - strand, within HP15_791 at 805.813 kb on - strand, within HP15_791 at 805.944 kb on - strand, within HP15_791 at 806.005 kb on + strand, within HP15_791 at 806.028 kb on - strand, within HP15_791 at 806.107 kb on - strand, within HP15_791 at 806.172 kb on - strand, within HP15_791 at 806.237 kb on + strand, within HP15_791 at 806.245 kb on - strand, within HP15_791 at 806.268 kb on + strand, within HP15_791 at 806.281 kb on - strand, within HP15_791 at 806.316 kb on - strand, within HP15_791 at 806.357 kb on + strand, within HP15_791 at 806.376 kb on - strand, within HP15_791 at 806.400 kb on + strand, within HP15_791 at 806.462 kb on + strand at 806.470 kb on - strand at 806.586 kb on - strand at 806.650 kb on - strand at 806.664 kb on - strand at 806.665 kb on - strand at 806.726 kb on - strand at 806.726 kb on - strand at 806.771 kb on - strand, within HP15_792 at 806.781 kb on - strand, within HP15_792 at 807.042 kb on - strand, within HP15_792 at 807.042 kb on - strand, within HP15_792 at 807.176 kb on - strand, within HP15_792 at 807.226 kb on + strand, within HP15_792 at 807.234 kb on - strand, within HP15_792 at 807.337 kb on + strand, within HP15_792 at 807.350 kb on - strand, within HP15_792 at 807.475 kb on + strand at 807.510 kb on + strand at 807.822 kb on - strand, within HP15_793 at 808.079 kb on + strand, within HP15_794 at 808.087 kb on - strand, within HP15_794 at 808.087 kb on - strand, within HP15_794 at 808.103 kb on + strand, within HP15_794 at 808.186 kb on + strand, within HP15_794 at 808.279 kb on + strand at 808.365 kb on + strand at 808.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 805,752 + HP15_791 0.60 +2.8 805,808 - HP15_791 0.63 -0.2 805,813 - HP15_791 0.63 +0.3 805,944 - HP15_791 0.69 -0.0 806,005 + HP15_791 0.71 +0.2 806,028 - HP15_791 0.72 -0.6 806,107 - HP15_791 0.76 -0.1 806,172 - HP15_791 0.79 +1.0 806,237 + HP15_791 0.81 +0.1 806,245 - HP15_791 0.82 +0.5 806,268 + HP15_791 0.83 -0.7 806,281 - HP15_791 0.83 -0.1 806,316 - HP15_791 0.85 -0.1 806,357 + HP15_791 0.87 -0.9 806,376 - HP15_791 0.88 +0.8 806,400 + HP15_791 0.89 -0.1 806,462 + +3.2 806,470 - -0.3 806,586 - -0.3 806,650 - +0.2 806,664 - +0.1 806,665 - +0.4 806,726 - +0.4 806,726 - +0.3 806,771 - HP15_792 0.14 +0.2 806,781 - HP15_792 0.15 +0.0 807,042 - HP15_792 0.45 +0.2 807,042 - HP15_792 0.45 -0.1 807,176 - HP15_792 0.61 +0.4 807,226 + HP15_792 0.67 -0.1 807,234 - HP15_792 0.68 +0.1 807,337 + HP15_792 0.80 +0.7 807,350 - HP15_792 0.81 -0.4 807,475 + -0.0 807,510 + -0.2 807,822 - HP15_793 0.50 -1.6 808,079 + HP15_794 0.23 -0.8 808,087 - HP15_794 0.26 -0.1 808,087 - HP15_794 0.26 -0.5 808,103 + HP15_794 0.33 -0.6 808,186 + HP15_794 0.69 -0.9 808,279 + +0.1 808,365 + -0.3 808,449 + +0.2
Or see this region's nucleotide sequence