Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_682 and HP15_683 overlap by 4 nucleotides HP15_683 and HP15_684 are separated by 23 nucleotides HP15_684 and HP15_tRNA13 are separated by 290 nucleotides
HP15_681: HP15_681 - conserved hypothetical protein, at 697,729 to 698,403
_681
HP15_682: HP15_682 - replication protein O, at 698,393 to 699,406
_682
HP15_683: HP15_683 - conserved hypothetical protein, at 699,403 to 700,191
_683
HP15_684: HP15_684 - hypothetical protein, at 700,215 to 700,508
_684
HP15_tRNA13: HP15_tRNA13 - tRNA-Met, at 700,799 to 700,874
_tRNA13
Position (kb) 699
700
701 Strain fitness (log2 ratio) -1
0
1
2
3 at 698.405 kb on + strand at 698.406 kb on - strand at 698.497 kb on + strand, within HP15_682 at 698.523 kb on - strand, within HP15_682 at 698.573 kb on + strand, within HP15_682 at 698.612 kb on + strand, within HP15_682 at 698.620 kb on + strand, within HP15_682 at 698.675 kb on + strand, within HP15_682 at 698.690 kb on - strand, within HP15_682 at 698.774 kb on + strand, within HP15_682 at 698.803 kb on + strand, within HP15_682 at 698.808 kb on + strand, within HP15_682 at 698.816 kb on - strand, within HP15_682 at 698.816 kb on - strand, within HP15_682 at 698.848 kb on - strand, within HP15_682 at 698.848 kb on - strand, within HP15_682 at 698.891 kb on - strand, within HP15_682 at 698.915 kb on - strand, within HP15_682 at 698.915 kb on - strand, within HP15_682 at 698.917 kb on + strand, within HP15_682 at 699.125 kb on - strand, within HP15_682 at 699.125 kb on - strand, within HP15_682 at 699.242 kb on - strand, within HP15_682 at 699.352 kb on - strand at 699.719 kb on + strand, within HP15_683 at 699.752 kb on + strand, within HP15_683 at 699.752 kb on + strand, within HP15_683 at 699.760 kb on - strand, within HP15_683 at 699.827 kb on + strand, within HP15_683 at 699.875 kb on - strand, within HP15_683 at 699.878 kb on + strand, within HP15_683 at 699.921 kb on - strand, within HP15_683 at 700.116 kb on + strand at 700.121 kb on + strand at 700.174 kb on + strand at 700.227 kb on + strand at 700.290 kb on + strand, within HP15_684 at 700.354 kb on + strand, within HP15_684 at 700.424 kb on + strand, within HP15_684 at 700.529 kb on + strand at 700.690 kb on + strand at 700.690 kb on + strand at 700.690 kb on + strand at 700.949 kb on + strand at 700.995 kb on + strand at 700.997 kb on + strand at 701.005 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 698,405 + +0.9 698,406 - +1.1 698,497 + HP15_682 0.10 +0.7 698,523 - HP15_682 0.13 -0.0 698,573 + HP15_682 0.18 +0.6 698,612 + HP15_682 0.22 +0.8 698,620 + HP15_682 0.22 +1.1 698,675 + HP15_682 0.28 +0.2 698,690 - HP15_682 0.29 +0.3 698,774 + HP15_682 0.38 -0.6 698,803 + HP15_682 0.40 +0.9 698,808 + HP15_682 0.41 +0.7 698,816 - HP15_682 0.42 +0.2 698,816 - HP15_682 0.42 +0.4 698,848 - HP15_682 0.45 -1.0 698,848 - HP15_682 0.45 +1.2 698,891 - HP15_682 0.49 -0.0 698,915 - HP15_682 0.51 +0.1 698,915 - HP15_682 0.51 +2.3 698,917 + HP15_682 0.52 +0.0 699,125 - HP15_682 0.72 +0.1 699,125 - HP15_682 0.72 +0.9 699,242 - HP15_682 0.84 +0.1 699,352 - +0.8 699,719 + HP15_683 0.40 +0.5 699,752 + HP15_683 0.44 +0.4 699,752 + HP15_683 0.44 -0.8 699,760 - HP15_683 0.45 +0.5 699,827 + HP15_683 0.54 +1.5 699,875 - HP15_683 0.60 +1.4 699,878 + HP15_683 0.60 +1.1 699,921 - HP15_683 0.66 +1.2 700,116 + +0.5 700,121 + +1.2 700,174 + +1.1 700,227 + +0.9 700,290 + HP15_684 0.26 +1.0 700,354 + HP15_684 0.47 +2.9 700,424 + HP15_684 0.71 +0.3 700,529 + -0.4 700,690 + +1.2 700,690 + +0.2 700,690 + +0.8 700,949 + +0.9 700,995 + -0.4 700,997 + -0.2 701,005 + +1.3
Or see this region's nucleotide sequence