Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_657 and HP15_658 overlap by 4 nucleotides HP15_658 and HP15_659 overlap by 4 nucleotides HP15_659 and HP15_660 are separated by 1 nucleotides
HP15_657: HP15_657 - phage tail fiber protein, at 677,783 to 679,219
_657
HP15_658: HP15_658 - secreted protein-putative xanthan lyase, at 679,216 to 681,789
_658
HP15_659: HP15_659 - hypothetical protein, at 681,786 to 682,568
_659
HP15_660: HP15_660 - hypothetical protein, at 682,570 to 682,953
_660
Position (kb) 679
680
681
682 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 678.273 kb on - strand, within HP15_657 at 678.319 kb on - strand, within HP15_657 at 678.333 kb on - strand, within HP15_657 at 678.409 kb on + strand, within HP15_657 at 678.409 kb on - strand, within HP15_657 at 678.466 kb on + strand, within HP15_657 at 678.479 kb on - strand, within HP15_657 at 678.500 kb on + strand, within HP15_657 at 678.505 kb on + strand, within HP15_657 at 678.515 kb on + strand, within HP15_657 at 678.560 kb on - strand, within HP15_657 at 678.624 kb on + strand, within HP15_657 at 678.624 kb on + strand, within HP15_657 at 678.664 kb on + strand, within HP15_657 at 678.664 kb on + strand, within HP15_657 at 678.779 kb on - strand, within HP15_657 at 678.826 kb on + strand, within HP15_657 at 678.853 kb on + strand, within HP15_657 at 678.900 kb on - strand, within HP15_657 at 678.964 kb on + strand, within HP15_657 at 678.995 kb on - strand, within HP15_657 at 679.085 kb on + strand at 679.107 kb on - strand at 679.233 kb on + strand at 679.244 kb on + strand at 679.312 kb on + strand at 679.463 kb on + strand at 679.619 kb on - strand, within HP15_658 at 679.798 kb on - strand, within HP15_658 at 679.825 kb on + strand, within HP15_658 at 679.833 kb on - strand, within HP15_658 at 679.833 kb on - strand, within HP15_658 at 679.833 kb on - strand, within HP15_658 at 679.925 kb on + strand, within HP15_658 at 679.942 kb on + strand, within HP15_658 at 679.942 kb on + strand, within HP15_658 at 679.950 kb on - strand, within HP15_658 at 679.950 kb on - strand, within HP15_658 at 679.965 kb on - strand, within HP15_658 at 680.160 kb on - strand, within HP15_658 at 680.160 kb on - strand, within HP15_658 at 680.166 kb on - strand, within HP15_658 at 680.199 kb on + strand, within HP15_658 at 680.199 kb on + strand, within HP15_658 at 680.199 kb on + strand, within HP15_658 at 680.207 kb on - strand, within HP15_658 at 680.257 kb on + strand, within HP15_658 at 680.265 kb on + strand, within HP15_658 at 680.273 kb on - strand, within HP15_658 at 680.273 kb on - strand, within HP15_658 at 680.609 kb on + strand, within HP15_658 at 680.625 kb on - strand, within HP15_658 at 680.632 kb on - strand, within HP15_658 at 680.668 kb on - strand, within HP15_658 at 680.681 kb on + strand, within HP15_658 at 680.705 kb on + strand, within HP15_658 at 680.717 kb on + strand, within HP15_658 at 680.720 kb on + strand, within HP15_658 at 680.739 kb on - strand, within HP15_658 at 680.742 kb on + strand, within HP15_658 at 680.742 kb on + strand, within HP15_658 at 680.742 kb on + strand, within HP15_658 at 680.743 kb on + strand, within HP15_658 at 680.748 kb on - strand, within HP15_658 at 680.750 kb on - strand, within HP15_658 at 680.873 kb on - strand, within HP15_658 at 680.947 kb on - strand, within HP15_658 at 681.011 kb on - strand, within HP15_658 at 681.025 kb on - strand, within HP15_658 at 681.081 kb on + strand, within HP15_658 at 681.160 kb on + strand, within HP15_658 at 681.168 kb on - strand, within HP15_658 at 681.217 kb on + strand, within HP15_658 at 681.217 kb on + strand, within HP15_658 at 681.225 kb on - strand, within HP15_658 at 681.256 kb on + strand, within HP15_658 at 681.304 kb on + strand, within HP15_658 at 681.304 kb on + strand, within HP15_658 at 681.312 kb on - strand, within HP15_658 at 681.312 kb on - strand, within HP15_658 at 681.321 kb on + strand, within HP15_658 at 681.321 kb on + strand, within HP15_658 at 681.321 kb on + strand, within HP15_658 at 681.365 kb on + strand, within HP15_658 at 681.381 kb on - strand, within HP15_658 at 681.396 kb on - strand, within HP15_658 at 681.414 kb on - strand, within HP15_658 at 681.511 kb on - strand, within HP15_658 at 681.513 kb on + strand, within HP15_658 at 681.513 kb on + strand, within HP15_658 at 681.513 kb on + strand, within HP15_658 at 681.513 kb on + strand, within HP15_658 at 681.521 kb on - strand, within HP15_658 at 681.521 kb on - strand, within HP15_658 at 681.521 kb on - strand, within HP15_658 at 681.574 kb on + strand at 681.605 kb on + strand at 681.646 kb on + strand at 681.646 kb on + strand at 681.705 kb on - strand at 681.736 kb on + strand at 681.771 kb on - strand at 681.771 kb on - strand at 681.962 kb on + strand, within HP15_659 at 681.977 kb on + strand, within HP15_659 at 682.165 kb on + strand, within HP15_659 at 682.175 kb on + strand, within HP15_659 at 682.324 kb on - strand, within HP15_659 at 682.325 kb on - strand, within HP15_659 at 682.338 kb on + strand, within HP15_659 at 682.359 kb on - strand, within HP15_659 at 682.417 kb on + strand, within HP15_659 at 682.514 kb on + strand at 682.554 kb on + strand at 682.573 kb on + strand at 682.573 kb on + strand at 682.581 kb on - strand at 682.581 kb on - strand at 682.639 kb on + strand, within HP15_660 at 682.640 kb on + strand, within HP15_660 at 682.644 kb on + strand, within HP15_660
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 678,273 - HP15_657 0.34 +2.2 678,319 - HP15_657 0.37 +1.9 678,333 - HP15_657 0.38 +0.6 678,409 + HP15_657 0.44 +1.9 678,409 - HP15_657 0.44 +1.3 678,466 + HP15_657 0.48 +1.5 678,479 - HP15_657 0.48 +1.8 678,500 + HP15_657 0.50 +1.1 678,505 + HP15_657 0.50 +2.2 678,515 + HP15_657 0.51 +1.1 678,560 - HP15_657 0.54 +2.5 678,624 + HP15_657 0.59 +2.7 678,624 + HP15_657 0.59 +2.3 678,664 + HP15_657 0.61 +2.0 678,664 + HP15_657 0.61 +1.2 678,779 - HP15_657 0.69 +2.1 678,826 + HP15_657 0.73 +0.8 678,853 + HP15_657 0.74 +4.3 678,900 - HP15_657 0.78 +1.9 678,964 + HP15_657 0.82 +0.7 678,995 - HP15_657 0.84 +1.9 679,085 + +3.3 679,107 - +3.0 679,233 + +0.8 679,244 + +2.0 679,312 + +1.4 679,463 + +2.3 679,619 - HP15_658 0.16 +1.1 679,798 - HP15_658 0.23 +0.4 679,825 + HP15_658 0.24 +0.9 679,833 - HP15_658 0.24 +2.0 679,833 - HP15_658 0.24 +1.2 679,833 - HP15_658 0.24 +1.1 679,925 + HP15_658 0.28 +1.4 679,942 + HP15_658 0.28 +0.4 679,942 + HP15_658 0.28 +1.4 679,950 - HP15_658 0.29 +2.0 679,950 - HP15_658 0.29 +1.2 679,965 - HP15_658 0.29 +0.3 680,160 - HP15_658 0.37 +1.4 680,160 - HP15_658 0.37 +1.3 680,166 - HP15_658 0.37 +1.8 680,199 + HP15_658 0.38 +1.8 680,199 + HP15_658 0.38 +1.6 680,199 + HP15_658 0.38 +2.0 680,207 - HP15_658 0.39 +1.3 680,257 + HP15_658 0.40 +1.5 680,265 + HP15_658 0.41 +1.1 680,273 - HP15_658 0.41 +2.1 680,273 - HP15_658 0.41 +1.8 680,609 + HP15_658 0.54 +1.7 680,625 - HP15_658 0.55 +0.8 680,632 - HP15_658 0.55 +1.5 680,668 - HP15_658 0.56 +1.9 680,681 + HP15_658 0.57 +0.9 680,705 + HP15_658 0.58 +2.3 680,717 + HP15_658 0.58 +1.4 680,720 + HP15_658 0.58 +1.2 680,739 - HP15_658 0.59 +2.1 680,742 + HP15_658 0.59 +2.2 680,742 + HP15_658 0.59 +1.6 680,742 + HP15_658 0.59 +1.3 680,743 + HP15_658 0.59 +1.6 680,748 - HP15_658 0.60 +1.2 680,750 - HP15_658 0.60 +1.6 680,873 - HP15_658 0.64 +1.5 680,947 - HP15_658 0.67 +1.4 681,011 - HP15_658 0.70 +1.2 681,025 - HP15_658 0.70 +1.9 681,081 + HP15_658 0.72 +1.8 681,160 + HP15_658 0.76 +1.6 681,168 - HP15_658 0.76 +1.7 681,217 + HP15_658 0.78 +0.7 681,217 + HP15_658 0.78 +1.2 681,225 - HP15_658 0.78 +1.9 681,256 + HP15_658 0.79 +1.2 681,304 + HP15_658 0.81 +2.0 681,304 + HP15_658 0.81 +1.4 681,312 - HP15_658 0.81 +2.2 681,312 - HP15_658 0.81 +0.8 681,321 + HP15_658 0.82 +1.6 681,321 + HP15_658 0.82 -0.0 681,321 + HP15_658 0.82 +1.5 681,365 + HP15_658 0.83 +1.1 681,381 - HP15_658 0.84 +2.1 681,396 - HP15_658 0.85 +1.6 681,414 - HP15_658 0.85 +0.8 681,511 - HP15_658 0.89 +2.6 681,513 + HP15_658 0.89 +0.9 681,513 + HP15_658 0.89 +1.5 681,513 + HP15_658 0.89 +1.7 681,513 + HP15_658 0.89 +0.9 681,521 - HP15_658 0.90 +2.2 681,521 - HP15_658 0.90 +2.3 681,521 - HP15_658 0.90 +0.7 681,574 + +2.1 681,605 + +1.0 681,646 + +1.2 681,646 + +0.1 681,705 - +1.6 681,736 + +1.8 681,771 - +1.6 681,771 - +1.8 681,962 + HP15_659 0.22 +0.5 681,977 + HP15_659 0.24 +2.7 682,165 + HP15_659 0.48 +1.4 682,175 + HP15_659 0.50 +1.9 682,324 - HP15_659 0.69 +0.4 682,325 - HP15_659 0.69 +1.5 682,338 + HP15_659 0.70 +1.4 682,359 - HP15_659 0.73 +1.7 682,417 + HP15_659 0.81 +0.9 682,514 + +1.0 682,554 + +0.6 682,573 + +0.6 682,573 + +1.2 682,581 - +1.4 682,581 - +0.9 682,639 + HP15_660 0.18 +1.6 682,640 + HP15_660 0.18 +0.7 682,644 + HP15_660 0.19 +1.5
Or see this region's nucleotide sequence