Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_360 and HP15_361 overlap by 4 nucleotides HP15_361 and HP15_362 are separated by 20 nucleotides
HP15_360: HP15_360 - conserved hypothetical protein, secreted, at 361,142 to 362,221
_360
HP15_361: HP15_361 - conserved hypothetical protein, secreted, at 362,218 to 362,766
_361
HP15_362: HP15_362 - conserved hypothetical protein, secreted, at 362,787 to 365,189
_362
Position (kb) 362
363 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 361.220 kb on + strand at 361.246 kb on - strand at 361.290 kb on + strand, within HP15_360 at 361.290 kb on + strand, within HP15_360 at 361.379 kb on + strand, within HP15_360 at 361.463 kb on - strand, within HP15_360 at 361.487 kb on + strand, within HP15_360 at 361.550 kb on + strand, within HP15_360 at 361.584 kb on - strand, within HP15_360 at 361.584 kb on - strand, within HP15_360 at 361.591 kb on + strand, within HP15_360 at 361.592 kb on + strand, within HP15_360 at 361.592 kb on + strand, within HP15_360 at 361.592 kb on + strand, within HP15_360 at 361.609 kb on + strand, within HP15_360 at 361.640 kb on - strand, within HP15_360 at 361.704 kb on - strand, within HP15_360 at 361.709 kb on - strand at 361.713 kb on + strand, within HP15_360 at 362.023 kb on + strand, within HP15_360 at 362.093 kb on + strand, within HP15_360 at 362.202 kb on + strand at 362.202 kb on - strand at 362.215 kb on - strand at 362.237 kb on + strand at 362.332 kb on - strand, within HP15_361 at 362.332 kb on - strand, within HP15_361 at 362.334 kb on + strand, within HP15_361 at 362.334 kb on + strand, within HP15_361 at 362.342 kb on - strand, within HP15_361 at 362.342 kb on - strand, within HP15_361 at 362.381 kb on + strand, within HP15_361 at 362.394 kb on - strand, within HP15_361 at 362.516 kb on + strand, within HP15_361 at 362.579 kb on - strand, within HP15_361 at 362.591 kb on + strand, within HP15_361 at 362.601 kb on + strand, within HP15_361 at 362.601 kb on + strand, within HP15_361 at 362.601 kb on + strand, within HP15_361 at 362.609 kb on - strand, within HP15_361 at 362.609 kb on - strand, within HP15_361 at 362.624 kb on - strand, within HP15_361 at 362.646 kb on + strand, within HP15_361 at 362.664 kb on - strand, within HP15_361 at 362.675 kb on + strand, within HP15_361 at 362.695 kb on - strand, within HP15_361 at 362.776 kb on + strand at 362.776 kb on + strand at 362.776 kb on + strand at 362.784 kb on - strand at 362.784 kb on - strand at 362.802 kb on - strand at 362.832 kb on + strand at 362.854 kb on - strand at 362.855 kb on - strand at 362.889 kb on - strand at 362.890 kb on + strand at 362.941 kb on + strand at 362.966 kb on + strand at 363.030 kb on - strand, within HP15_362 at 363.064 kb on + strand, within HP15_362 at 363.160 kb on + strand, within HP15_362 at 363.346 kb on + strand, within HP15_362 at 363.346 kb on + strand, within HP15_362 at 363.352 kb on + strand, within HP15_362 at 363.352 kb on + strand, within HP15_362 at 363.707 kb on + strand, within HP15_362 at 363.712 kb on + strand, within HP15_362 at 363.717 kb on + strand, within HP15_362 at 363.723 kb on + strand, within HP15_362 at 363.723 kb on + strand, within HP15_362
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 361,220 + -0.1 361,246 - +0.3 361,290 + HP15_360 0.14 +1.5 361,290 + HP15_360 0.14 +0.4 361,379 + HP15_360 0.22 -1.7 361,463 - HP15_360 0.30 -0.2 361,487 + HP15_360 0.32 -0.0 361,550 + HP15_360 0.38 +0.7 361,584 - HP15_360 0.41 +0.5 361,584 - HP15_360 0.41 +1.1 361,591 + HP15_360 0.42 -0.4 361,592 + HP15_360 0.42 -1.1 361,592 + HP15_360 0.42 +0.2 361,592 + HP15_360 0.42 -0.4 361,609 + HP15_360 0.43 +0.3 361,640 - HP15_360 0.46 -0.3 361,704 - HP15_360 0.52 -0.1 361,709 - -0.6 361,713 + HP15_360 0.53 +0.4 362,023 + HP15_360 0.82 +0.4 362,093 + HP15_360 0.88 +1.7 362,202 + +0.3 362,202 - -0.2 362,215 - -0.6 362,237 + -0.6 362,332 - HP15_361 0.21 -0.9 362,332 - HP15_361 0.21 +0.3 362,334 + HP15_361 0.21 +0.8 362,334 + HP15_361 0.21 -0.3 362,342 - HP15_361 0.23 +0.9 362,342 - HP15_361 0.23 +0.4 362,381 + HP15_361 0.30 +1.3 362,394 - HP15_361 0.32 +0.1 362,516 + HP15_361 0.54 -0.4 362,579 - HP15_361 0.66 +3.4 362,591 + HP15_361 0.68 +0.7 362,601 + HP15_361 0.70 -0.3 362,601 + HP15_361 0.70 -1.5 362,601 + HP15_361 0.70 +0.4 362,609 - HP15_361 0.71 +0.1 362,609 - HP15_361 0.71 +0.0 362,624 - HP15_361 0.74 +0.1 362,646 + HP15_361 0.78 -1.3 362,664 - HP15_361 0.81 -1.7 362,675 + HP15_361 0.83 +1.0 362,695 - HP15_361 0.87 -0.1 362,776 + -0.0 362,776 + -1.7 362,776 + -0.2 362,784 - +0.2 362,784 - -1.1 362,802 - -0.2 362,832 + -2.3 362,854 - -0.1 362,855 - -0.6 362,889 - -0.0 362,890 + +0.4 362,941 + +0.7 362,966 + +0.1 363,030 - HP15_362 0.10 -0.1 363,064 + HP15_362 0.12 -0.3 363,160 + HP15_362 0.16 +1.4 363,346 + HP15_362 0.23 +0.3 363,346 + HP15_362 0.23 -0.7 363,352 + HP15_362 0.24 -1.9 363,352 + HP15_362 0.24 +0.0 363,707 + HP15_362 0.38 -0.3 363,712 + HP15_362 0.38 -0.7 363,717 + HP15_362 0.39 +0.2 363,723 + HP15_362 0.39 -0.5 363,723 + HP15_362 0.39 +0.4
Or see this region's nucleotide sequence