Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3568 and HP15_3569 are separated by 191 nucleotides HP15_3569 and HP15_3570 are separated by 44 nucleotides
HP15_3568: HP15_3568 - beta-lactamase domain protein, at 3,758,597 to 3,760,234
_3568
HP15_3569: HP15_3569 - succinylglutamate desuccinylase/aspartoacylase, at 3,760,426 to 3,761,817
_3569
HP15_3570: HP15_3570 - membrane protein containing DUF6, transmembrane, at 3,761,862 to 3,762,830
_3570
Position (kb)
3760
3761
3762 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3759.501 kb on - strand, within HP15_3568 at 3759.558 kb on - strand, within HP15_3568 at 3759.575 kb on - strand, within HP15_3568 at 3759.625 kb on - strand, within HP15_3568 at 3759.625 kb on - strand, within HP15_3568 at 3759.759 kb on - strand, within HP15_3568 at 3759.765 kb on - strand, within HP15_3568 at 3759.778 kb on - strand, within HP15_3568 at 3759.779 kb on + strand, within HP15_3568 at 3759.801 kb on + strand, within HP15_3568 at 3759.867 kb on - strand, within HP15_3568 at 3759.868 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.870 kb on + strand, within HP15_3568 at 3759.876 kb on - strand, within HP15_3568 at 3759.876 kb on - strand, within HP15_3568 at 3759.878 kb on - strand, within HP15_3568 at 3759.910 kb on + strand, within HP15_3568 at 3759.910 kb on + strand, within HP15_3568 at 3759.954 kb on - strand, within HP15_3568 at 3760.012 kb on + strand, within HP15_3568 at 3760.038 kb on + strand, within HP15_3568 at 3760.206 kb on + strand at 3760.305 kb on - strand at 3760.352 kb on - strand at 3760.386 kb on + strand at 3760.394 kb on - strand at 3760.440 kb on + strand at 3760.566 kb on + strand, within HP15_3569 at 3760.685 kb on + strand, within HP15_3569 at 3760.747 kb on + strand, within HP15_3569 at 3760.790 kb on + strand, within HP15_3569 at 3760.872 kb on - strand, within HP15_3569 at 3760.873 kb on - strand, within HP15_3569 at 3760.909 kb on + strand, within HP15_3569 at 3760.922 kb on - strand, within HP15_3569 at 3760.947 kb on + strand, within HP15_3569 at 3760.947 kb on + strand, within HP15_3569 at 3760.955 kb on - strand, within HP15_3569 at 3760.991 kb on + strand, within HP15_3569 at 3760.999 kb on - strand, within HP15_3569 at 3761.005 kb on - strand, within HP15_3569 at 3761.041 kb on + strand, within HP15_3569 at 3761.093 kb on - strand, within HP15_3569 at 3761.330 kb on + strand, within HP15_3569 at 3761.365 kb on - strand, within HP15_3569 at 3761.487 kb on - strand, within HP15_3569 at 3761.502 kb on - strand, within HP15_3569 at 3761.511 kb on - strand, within HP15_3569 at 3761.593 kb on + strand, within HP15_3569 at 3761.688 kb on + strand at 3761.744 kb on + strand at 3761.849 kb on - strand at 3761.854 kb on - strand at 3761.854 kb on - strand at 3761.856 kb on + strand at 3761.906 kb on + strand at 3761.906 kb on + strand at 3762.003 kb on + strand, within HP15_3570 at 3762.021 kb on - strand, within HP15_3570 at 3762.131 kb on + strand, within HP15_3570 at 3762.139 kb on - strand, within HP15_3570 at 3762.178 kb on + strand, within HP15_3570 at 3762.183 kb on + strand, within HP15_3570 at 3762.191 kb on - strand, within HP15_3570 at 3762.191 kb on - strand, within HP15_3570 at 3762.335 kb on - strand, within HP15_3570 at 3762.378 kb on + strand, within HP15_3570 at 3762.378 kb on + strand, within HP15_3570 at 3762.590 kb on - strand, within HP15_3570 at 3762.627 kb on - strand, within HP15_3570 at 3762.629 kb on + strand, within HP15_3570 at 3762.661 kb on - strand, within HP15_3570 at 3762.777 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,759,501 - HP15_3568 0.55 -0.7 3,759,558 - HP15_3568 0.59 -0.1 3,759,575 - HP15_3568 0.60 +0.9 3,759,625 - HP15_3568 0.63 -0.1 3,759,625 - HP15_3568 0.63 -0.7 3,759,759 - HP15_3568 0.71 +0.4 3,759,765 - HP15_3568 0.71 +0.5 3,759,778 - HP15_3568 0.72 +0.2 3,759,779 + HP15_3568 0.72 -0.5 3,759,801 + HP15_3568 0.74 +0.4 3,759,867 - HP15_3568 0.78 -0.7 3,759,868 + HP15_3568 0.78 -0.1 3,759,870 + HP15_3568 0.78 -0.5 3,759,870 + HP15_3568 0.78 -0.6 3,759,870 + HP15_3568 0.78 +0.3 3,759,870 + HP15_3568 0.78 +0.6 3,759,876 - HP15_3568 0.78 -0.1 3,759,876 - HP15_3568 0.78 +0.2 3,759,878 - HP15_3568 0.78 +0.0 3,759,910 + HP15_3568 0.80 +1.3 3,759,910 + HP15_3568 0.80 +0.7 3,759,954 - HP15_3568 0.83 -0.9 3,760,012 + HP15_3568 0.86 +1.7 3,760,038 + HP15_3568 0.88 +1.3 3,760,206 + +0.1 3,760,305 - +0.1 3,760,352 - +0.0 3,760,386 + +0.1 3,760,394 - +1.0 3,760,440 + +0.4 3,760,566 + HP15_3569 0.10 -0.1 3,760,685 + HP15_3569 0.19 +0.1 3,760,747 + HP15_3569 0.23 +1.0 3,760,790 + HP15_3569 0.26 -0.9 3,760,872 - HP15_3569 0.32 +0.1 3,760,873 - HP15_3569 0.32 +0.3 3,760,909 + HP15_3569 0.35 +0.4 3,760,922 - HP15_3569 0.36 +0.5 3,760,947 + HP15_3569 0.37 +0.4 3,760,947 + HP15_3569 0.37 -0.2 3,760,955 - HP15_3569 0.38 -0.1 3,760,991 + HP15_3569 0.41 +0.1 3,760,999 - HP15_3569 0.41 +0.1 3,761,005 - HP15_3569 0.42 -0.0 3,761,041 + HP15_3569 0.44 +0.6 3,761,093 - HP15_3569 0.48 -0.7 3,761,330 + HP15_3569 0.65 +0.2 3,761,365 - HP15_3569 0.67 +0.2 3,761,487 - HP15_3569 0.76 +0.3 3,761,502 - HP15_3569 0.77 -0.5 3,761,511 - HP15_3569 0.78 -0.1 3,761,593 + HP15_3569 0.84 +1.2 3,761,688 + +0.2 3,761,744 + +0.7 3,761,849 - -0.4 3,761,854 - -0.1 3,761,854 - -1.4 3,761,856 + -0.6 3,761,906 + -0.3 3,761,906 + -0.1 3,762,003 + HP15_3570 0.15 -0.5 3,762,021 - HP15_3570 0.16 -0.0 3,762,131 + HP15_3570 0.28 -0.1 3,762,139 - HP15_3570 0.29 -0.6 3,762,178 + HP15_3570 0.33 -0.2 3,762,183 + HP15_3570 0.33 +0.5 3,762,191 - HP15_3570 0.34 +2.8 3,762,191 - HP15_3570 0.34 +0.0 3,762,335 - HP15_3570 0.49 -0.0 3,762,378 + HP15_3570 0.53 -0.1 3,762,378 + HP15_3570 0.53 -0.7 3,762,590 - HP15_3570 0.75 +0.5 3,762,627 - HP15_3570 0.79 -0.1 3,762,629 + HP15_3570 0.79 -0.0 3,762,661 - HP15_3570 0.82 +0.2 3,762,777 + -1.5
Or see this region's nucleotide sequence