Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3497 and HP15_3498 are separated by 217 nucleotides HP15_3498 and HP15_3499 are separated by 87 nucleotides HP15_3499 and HP15_3500 are separated by 44 nucleotides
HP15_3497: HP15_3497 - Hsp33-like chaperonin, at 3,681,028 to 3,681,882
_3497
HP15_3498: HP15_3498 - phosphoenolpyruvate carboxykinase (ATP), at 3,682,100 to 3,683,590
_3498
HP15_3499: HP15_3499 - conserved hypothetical protein, membrane, at 3,683,678 to 3,683,956
_3499
HP15_3500: HP15_3500 - conserved hypothetical protein, membrane, at 3,684,001 to 3,685,035
_3500
Position (kb)
3682
3683
3684 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3681.107 kb on + strand at 3681.145 kb on - strand, within HP15_3497 at 3681.305 kb on + strand, within HP15_3497 at 3681.313 kb on - strand, within HP15_3497 at 3681.407 kb on + strand, within HP15_3497 at 3681.415 kb on - strand, within HP15_3497 at 3681.556 kb on - strand, within HP15_3497 at 3681.568 kb on + strand, within HP15_3497 at 3681.654 kb on + strand, within HP15_3497 at 3681.678 kb on + strand, within HP15_3497 at 3681.713 kb on + strand, within HP15_3497 at 3681.721 kb on - strand, within HP15_3497 at 3681.730 kb on - strand, within HP15_3497 at 3681.738 kb on + strand, within HP15_3497 at 3681.770 kb on - strand, within HP15_3497 at 3683.584 kb on + strand at 3683.659 kb on - strand at 3683.669 kb on - strand at 3683.745 kb on - strand, within HP15_3499 at 3683.766 kb on + strand, within HP15_3499 at 3684.084 kb on + strand at 3684.086 kb on + strand at 3684.125 kb on + strand, within HP15_3500 at 3684.200 kb on + strand, within HP15_3500 at 3684.208 kb on - strand, within HP15_3500 at 3684.208 kb on - strand, within HP15_3500 at 3684.215 kb on + strand, within HP15_3500 at 3684.229 kb on + strand, within HP15_3500 at 3684.232 kb on - strand, within HP15_3500 at 3684.234 kb on + strand, within HP15_3500 at 3684.237 kb on - strand, within HP15_3500 at 3684.237 kb on - strand, within HP15_3500 at 3684.242 kb on - strand, within HP15_3500 at 3684.386 kb on + strand, within HP15_3500 at 3684.416 kb on - strand, within HP15_3500 at 3684.436 kb on - strand, within HP15_3500 at 3684.448 kb on + strand, within HP15_3500 at 3684.453 kb on + strand, within HP15_3500 at 3684.461 kb on - strand, within HP15_3500
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,681,107 + +0.4 3,681,145 - HP15_3497 0.14 +0.4 3,681,305 + HP15_3497 0.32 +1.6 3,681,313 - HP15_3497 0.33 +0.3 3,681,407 + HP15_3497 0.44 +1.0 3,681,415 - HP15_3497 0.45 +2.4 3,681,556 - HP15_3497 0.62 -0.3 3,681,568 + HP15_3497 0.63 -0.3 3,681,654 + HP15_3497 0.73 -0.0 3,681,678 + HP15_3497 0.76 -0.2 3,681,713 + HP15_3497 0.80 +0.0 3,681,721 - HP15_3497 0.81 +0.6 3,681,730 - HP15_3497 0.82 +3.8 3,681,738 + HP15_3497 0.83 -1.2 3,681,770 - HP15_3497 0.87 -0.2 3,683,584 + -0.2 3,683,659 - -0.1 3,683,669 - +0.3 3,683,745 - HP15_3499 0.24 +0.0 3,683,766 + HP15_3499 0.32 -0.6 3,684,084 + -0.8 3,684,086 + -0.2 3,684,125 + HP15_3500 0.12 +0.4 3,684,200 + HP15_3500 0.19 +0.1 3,684,208 - HP15_3500 0.20 -0.2 3,684,208 - HP15_3500 0.20 -0.5 3,684,215 + HP15_3500 0.21 +0.2 3,684,229 + HP15_3500 0.22 -0.1 3,684,232 - HP15_3500 0.22 -0.0 3,684,234 + HP15_3500 0.23 -0.1 3,684,237 - HP15_3500 0.23 +1.0 3,684,237 - HP15_3500 0.23 -2.7 3,684,242 - HP15_3500 0.23 -0.4 3,684,386 + HP15_3500 0.37 -0.9 3,684,416 - HP15_3500 0.40 +0.3 3,684,436 - HP15_3500 0.42 -0.2 3,684,448 + HP15_3500 0.43 +0.0 3,684,453 + HP15_3500 0.44 -0.4 3,684,461 - HP15_3500 0.44 -0.1
Or see this region's nucleotide sequence