Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3431 and HP15_3432 are separated by 40 nucleotides HP15_3432 and HP15_3433 are separated by 78 nucleotides HP15_3433 and HP15_3434 are separated by 0 nucleotides HP15_3434 and HP15_3435 are separated by 152 nucleotides
HP15_3431: HP15_3431 - multi-sensor signal transduction histidine kinase, at 3,607,942 to 3,609,765
_3431
HP15_3432: HP15_3432 - bacterioferritin, at 3,609,806 to 3,610,345
_3432
HP15_3433: HP15_3433 - Aconitate hydratase (EC 4.2.1.3) (from data) , at 3,610,424 to 3,613,183
_3433
HP15_3434: HP15_3434 - hypothetical protein, at 3,613,184 to 3,613,291
_3434
HP15_3435: HP15_3435 - methyl-accepting chemotaxis protein, at 3,613,444 to 3,614,964
_3435
Position (kb)
3610
3611
3612
3613
3614 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3609.438 kb on - strand, within HP15_3431 at 3609.477 kb on + strand, within HP15_3431 at 3609.547 kb on - strand, within HP15_3431 at 3609.566 kb on - strand, within HP15_3431 at 3609.604 kb on + strand at 3609.620 kb on + strand at 3609.645 kb on - strand at 3609.919 kb on + strand, within HP15_3432 at 3610.127 kb on + strand, within HP15_3432 at 3610.135 kb on - strand, within HP15_3432 at 3610.262 kb on - strand, within HP15_3432 at 3610.311 kb on - strand at 3610.349 kb on - strand at 3610.375 kb on + strand at 3610.429 kb on - strand at 3610.431 kb on + strand at 3610.473 kb on + strand at 3610.526 kb on + strand at 3610.539 kb on - strand at 3610.640 kb on + strand at 3610.693 kb on + strand at 3610.783 kb on + strand, within HP15_3433 at 3610.798 kb on - strand, within HP15_3433 at 3610.878 kb on - strand, within HP15_3433 at 3610.958 kb on + strand, within HP15_3433 at 3610.958 kb on + strand, within HP15_3433 at 3610.966 kb on - strand, within HP15_3433 at 3611.005 kb on - strand, within HP15_3433 at 3611.165 kb on - strand, within HP15_3433 at 3611.192 kb on - strand, within HP15_3433 at 3611.213 kb on + strand, within HP15_3433 at 3611.221 kb on - strand, within HP15_3433 at 3611.221 kb on - strand, within HP15_3433 at 3611.221 kb on - strand, within HP15_3433 at 3611.407 kb on + strand, within HP15_3433 at 3611.421 kb on + strand, within HP15_3433 at 3611.588 kb on - strand, within HP15_3433 at 3611.609 kb on + strand, within HP15_3433 at 3611.650 kb on + strand, within HP15_3433 at 3611.694 kb on - strand, within HP15_3433 at 3611.715 kb on + strand, within HP15_3433 at 3611.729 kb on + strand, within HP15_3433 at 3611.729 kb on + strand, within HP15_3433 at 3611.737 kb on - strand, within HP15_3433 at 3611.759 kb on + strand, within HP15_3433 at 3611.767 kb on - strand, within HP15_3433 at 3611.805 kb on - strand, within HP15_3433 at 3611.843 kb on - strand, within HP15_3433 at 3611.954 kb on + strand, within HP15_3433 at 3611.962 kb on - strand, within HP15_3433 at 3611.974 kb on - strand, within HP15_3433 at 3612.016 kb on + strand, within HP15_3433 at 3612.029 kb on - strand, within HP15_3433 at 3612.101 kb on - strand, within HP15_3433 at 3612.136 kb on - strand, within HP15_3433 at 3612.136 kb on - strand, within HP15_3433 at 3612.136 kb on - strand, within HP15_3433 at 3612.306 kb on + strand, within HP15_3433 at 3612.314 kb on - strand, within HP15_3433 at 3612.376 kb on - strand, within HP15_3433 at 3612.376 kb on - strand, within HP15_3433 at 3612.412 kb on + strand, within HP15_3433 at 3612.421 kb on - strand, within HP15_3433 at 3612.513 kb on - strand, within HP15_3433 at 3612.528 kb on + strand, within HP15_3433 at 3612.570 kb on + strand, within HP15_3433 at 3612.571 kb on - strand, within HP15_3433 at 3612.578 kb on + strand, within HP15_3433 at 3612.600 kb on + strand, within HP15_3433 at 3612.750 kb on - strand, within HP15_3433 at 3612.783 kb on - strand, within HP15_3433 at 3612.924 kb on + strand at 3612.932 kb on - strand at 3612.934 kb on + strand at 3612.986 kb on - strand at 3613.000 kb on + strand at 3613.089 kb on + strand at 3613.089 kb on + strand at 3613.097 kb on - strand at 3613.097 kb on - strand at 3613.298 kb on - strand at 3613.318 kb on + strand at 3613.326 kb on - strand at 3613.442 kb on + strand at 3613.442 kb on + strand at 3613.450 kb on - strand at 3613.450 kb on - strand at 3613.497 kb on + strand at 3613.497 kb on + strand at 3613.511 kb on + strand at 3613.511 kb on + strand at 3613.519 kb on - strand at 3613.643 kb on + strand, within HP15_3435 at 3613.715 kb on + strand, within HP15_3435 at 3613.728 kb on - strand, within HP15_3435 at 3613.752 kb on + strand, within HP15_3435 at 3613.811 kb on + strand, within HP15_3435 at 3613.831 kb on + strand, within HP15_3435 at 3613.834 kb on - strand, within HP15_3435 at 3613.869 kb on - strand, within HP15_3435 at 3613.874 kb on + strand, within HP15_3435 at 3614.063 kb on + strand, within HP15_3435 at 3614.177 kb on + strand, within HP15_3435
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,609,438 - HP15_3431 0.82 -0.9 3,609,477 + HP15_3431 0.84 -0.1 3,609,547 - HP15_3431 0.88 +2.1 3,609,566 - HP15_3431 0.89 -0.6 3,609,604 + -3.0 3,609,620 + -0.4 3,609,645 - -0.3 3,609,919 + HP15_3432 0.21 -0.3 3,610,127 + HP15_3432 0.59 -1.2 3,610,135 - HP15_3432 0.61 +0.4 3,610,262 - HP15_3432 0.84 -0.7 3,610,311 - -0.1 3,610,349 - +1.0 3,610,375 + +0.9 3,610,429 - +0.3 3,610,431 + -1.1 3,610,473 + -0.2 3,610,526 + +1.2 3,610,539 - +1.6 3,610,640 + -0.2 3,610,693 + +1.2 3,610,783 + HP15_3433 0.13 -0.2 3,610,798 - HP15_3433 0.14 +0.5 3,610,878 - HP15_3433 0.16 +0.1 3,610,958 + HP15_3433 0.19 -1.0 3,610,958 + HP15_3433 0.19 -0.4 3,610,966 - HP15_3433 0.20 +1.0 3,611,005 - HP15_3433 0.21 -0.8 3,611,165 - HP15_3433 0.27 -0.1 3,611,192 - HP15_3433 0.28 +1.1 3,611,213 + HP15_3433 0.29 -0.4 3,611,221 - HP15_3433 0.29 -0.9 3,611,221 - HP15_3433 0.29 -0.4 3,611,221 - HP15_3433 0.29 -0.6 3,611,407 + HP15_3433 0.36 +0.0 3,611,421 + HP15_3433 0.36 -1.0 3,611,588 - HP15_3433 0.42 +0.1 3,611,609 + HP15_3433 0.43 -0.8 3,611,650 + HP15_3433 0.44 -0.2 3,611,694 - HP15_3433 0.46 -0.6 3,611,715 + HP15_3433 0.47 -0.7 3,611,729 + HP15_3433 0.47 -2.0 3,611,729 + HP15_3433 0.47 +0.6 3,611,737 - HP15_3433 0.48 +0.3 3,611,759 + HP15_3433 0.48 +3.3 3,611,767 - HP15_3433 0.49 -0.0 3,611,805 - HP15_3433 0.50 -0.0 3,611,843 - HP15_3433 0.51 -0.9 3,611,954 + HP15_3433 0.55 +1.5 3,611,962 - HP15_3433 0.56 -0.3 3,611,974 - HP15_3433 0.56 -0.6 3,612,016 + HP15_3433 0.58 -0.2 3,612,029 - HP15_3433 0.58 -0.6 3,612,101 - HP15_3433 0.61 -0.2 3,612,136 - HP15_3433 0.62 -1.3 3,612,136 - HP15_3433 0.62 +0.4 3,612,136 - HP15_3433 0.62 -0.8 3,612,306 + HP15_3433 0.68 -0.2 3,612,314 - HP15_3433 0.68 +0.0 3,612,376 - HP15_3433 0.71 +0.7 3,612,376 - HP15_3433 0.71 +0.6 3,612,412 + HP15_3433 0.72 -0.0 3,612,421 - HP15_3433 0.72 -0.2 3,612,513 - HP15_3433 0.76 -0.6 3,612,528 + HP15_3433 0.76 -0.2 3,612,570 + HP15_3433 0.78 -0.5 3,612,571 - HP15_3433 0.78 +0.5 3,612,578 + HP15_3433 0.78 -1.2 3,612,600 + HP15_3433 0.79 +0.2 3,612,750 - HP15_3433 0.84 +0.6 3,612,783 - HP15_3433 0.85 +0.1 3,612,924 + -0.8 3,612,932 - +1.4 3,612,934 + -0.0 3,612,986 - +0.1 3,613,000 + +1.2 3,613,089 + -0.2 3,613,089 + +0.3 3,613,097 - +0.8 3,613,097 - +0.9 3,613,298 - +0.3 3,613,318 + -0.1 3,613,326 - +2.2 3,613,442 + -0.2 3,613,442 + +0.0 3,613,450 - -0.5 3,613,450 - -0.1 3,613,497 + -0.3 3,613,497 + -0.4 3,613,511 + +0.3 3,613,511 + -0.2 3,613,519 - -0.1 3,613,643 + HP15_3435 0.13 -0.1 3,613,715 + HP15_3435 0.18 -0.8 3,613,728 - HP15_3435 0.19 +1.1 3,613,752 + HP15_3435 0.20 +0.3 3,613,811 + HP15_3435 0.24 +0.6 3,613,831 + HP15_3435 0.25 +0.8 3,613,834 - HP15_3435 0.26 -0.4 3,613,869 - HP15_3435 0.28 -0.2 3,613,874 + HP15_3435 0.28 +0.5 3,614,063 + HP15_3435 0.41 +0.7 3,614,177 + HP15_3435 0.48 +0.5
Or see this region's nucleotide sequence