Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3301 and HP15_3302 are separated by 108 nucleotides HP15_3302 and HP15_3303 are separated by 70 nucleotides HP15_3303 and HP15_3304 overlap by 17 nucleotides
HP15_3301: HP15_3301 - glutathione S-transferase, at 3,459,077 to 3,459,823
_3301
HP15_3302: HP15_3302 - sterol desaturase family protein, at 3,459,932 to 3,460,918
_3302
HP15_3303: HP15_3303 - lysophospholipase, at 3,460,989 to 3,461,846
_3303
HP15_3304: HP15_3304 - molybdenum ABC transporter, periplasmic binding protein, at 3,461,830 to 3,462,633
_3304
Position (kb)
3459
3460
3461 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3458.974 kb on + strand at 3459.031 kb on - strand at 3459.083 kb on - strand at 3459.089 kb on - strand at 3459.233 kb on - strand, within HP15_3301 at 3459.260 kb on + strand, within HP15_3301 at 3459.268 kb on - strand, within HP15_3301 at 3459.268 kb on - strand, within HP15_3301 at 3459.268 kb on - strand, within HP15_3301 at 3459.268 kb on - strand, within HP15_3301 at 3459.273 kb on - strand, within HP15_3301 at 3459.347 kb on - strand, within HP15_3301 at 3459.492 kb on + strand, within HP15_3301 at 3459.500 kb on - strand, within HP15_3301 at 3459.581 kb on + strand, within HP15_3301 at 3459.602 kb on + strand, within HP15_3301 at 3459.656 kb on - strand, within HP15_3301 at 3459.673 kb on + strand, within HP15_3301 at 3459.715 kb on + strand, within HP15_3301 at 3459.723 kb on - strand, within HP15_3301 at 3459.775 kb on + strand at 3459.783 kb on - strand at 3459.816 kb on - strand at 3459.945 kb on + strand at 3460.065 kb on + strand, within HP15_3302 at 3460.120 kb on + strand, within HP15_3302 at 3460.174 kb on + strand, within HP15_3302 at 3460.182 kb on - strand, within HP15_3302 at 3460.202 kb on + strand, within HP15_3302 at 3460.202 kb on + strand, within HP15_3302 at 3460.211 kb on - strand, within HP15_3302 at 3460.211 kb on - strand, within HP15_3302 at 3460.277 kb on + strand, within HP15_3302 at 3460.308 kb on + strand, within HP15_3302 at 3460.314 kb on + strand, within HP15_3302 at 3460.314 kb on + strand, within HP15_3302 at 3460.388 kb on - strand, within HP15_3302 at 3460.429 kb on - strand, within HP15_3302 at 3460.456 kb on + strand, within HP15_3302 at 3460.481 kb on + strand, within HP15_3302 at 3460.481 kb on + strand, within HP15_3302 at 3460.482 kb on + strand, within HP15_3302 at 3460.484 kb on - strand, within HP15_3302 at 3460.712 kb on - strand, within HP15_3302 at 3460.716 kb on - strand, within HP15_3302 at 3460.733 kb on - strand, within HP15_3302 at 3460.749 kb on - strand, within HP15_3302 at 3460.905 kb on - strand at 3461.121 kb on - strand, within HP15_3303 at 3461.185 kb on + strand, within HP15_3303 at 3461.235 kb on + strand, within HP15_3303 at 3461.238 kb on - strand, within HP15_3303 at 3461.240 kb on + strand, within HP15_3303 at 3461.248 kb on - strand, within HP15_3303 at 3461.248 kb on - strand, within HP15_3303 at 3461.248 kb on - strand, within HP15_3303 at 3461.275 kb on + strand, within HP15_3303 at 3461.283 kb on - strand, within HP15_3303 at 3461.283 kb on - strand, within HP15_3303 at 3461.354 kb on + strand, within HP15_3303 at 3461.398 kb on + strand, within HP15_3303 at 3461.398 kb on + strand, within HP15_3303 at 3461.465 kb on + strand, within HP15_3303 at 3461.513 kb on - strand, within HP15_3303 at 3461.783 kb on + strand at 3461.783 kb on + strand at 3461.820 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,458,974 + -1.0 3,459,031 - -1.2 3,459,083 - +0.2 3,459,089 - -0.4 3,459,233 - HP15_3301 0.21 -0.7 3,459,260 + HP15_3301 0.24 +1.9 3,459,268 - HP15_3301 0.26 -2.2 3,459,268 - HP15_3301 0.26 -0.3 3,459,268 - HP15_3301 0.26 -0.2 3,459,268 - HP15_3301 0.26 -0.1 3,459,273 - HP15_3301 0.26 -0.4 3,459,347 - HP15_3301 0.36 -0.6 3,459,492 + HP15_3301 0.56 -1.2 3,459,500 - HP15_3301 0.57 +1.5 3,459,581 + HP15_3301 0.67 -0.6 3,459,602 + HP15_3301 0.70 -0.8 3,459,656 - HP15_3301 0.78 +0.9 3,459,673 + HP15_3301 0.80 -1.4 3,459,715 + HP15_3301 0.85 -0.3 3,459,723 - HP15_3301 0.86 -0.5 3,459,775 + +0.0 3,459,783 - +0.1 3,459,816 - -1.2 3,459,945 + +0.7 3,460,065 + HP15_3302 0.13 +0.2 3,460,120 + HP15_3302 0.19 +0.4 3,460,174 + HP15_3302 0.25 +0.4 3,460,182 - HP15_3302 0.25 +1.5 3,460,202 + HP15_3302 0.27 +1.2 3,460,202 + HP15_3302 0.27 +0.0 3,460,211 - HP15_3302 0.28 -1.9 3,460,211 - HP15_3302 0.28 +1.1 3,460,277 + HP15_3302 0.35 +0.2 3,460,308 + HP15_3302 0.38 -0.2 3,460,314 + HP15_3302 0.39 +0.1 3,460,314 + HP15_3302 0.39 -0.1 3,460,388 - HP15_3302 0.46 +0.1 3,460,429 - HP15_3302 0.50 -1.7 3,460,456 + HP15_3302 0.53 -0.4 3,460,481 + HP15_3302 0.56 +0.1 3,460,481 + HP15_3302 0.56 +0.6 3,460,482 + HP15_3302 0.56 +0.7 3,460,484 - HP15_3302 0.56 +0.5 3,460,712 - HP15_3302 0.79 +0.7 3,460,716 - HP15_3302 0.79 -0.3 3,460,733 - HP15_3302 0.81 +1.8 3,460,749 - HP15_3302 0.83 -0.2 3,460,905 - +0.2 3,461,121 - HP15_3303 0.15 -0.4 3,461,185 + HP15_3303 0.23 +0.6 3,461,235 + HP15_3303 0.29 -0.1 3,461,238 - HP15_3303 0.29 -1.8 3,461,240 + HP15_3303 0.29 -0.1 3,461,248 - HP15_3303 0.30 +0.2 3,461,248 - HP15_3303 0.30 -1.4 3,461,248 - HP15_3303 0.30 -0.4 3,461,275 + HP15_3303 0.33 -0.9 3,461,283 - HP15_3303 0.34 -0.7 3,461,283 - HP15_3303 0.34 +0.3 3,461,354 + HP15_3303 0.43 +0.2 3,461,398 + HP15_3303 0.48 +0.3 3,461,398 + HP15_3303 0.48 -0.1 3,461,465 + HP15_3303 0.55 -0.8 3,461,513 - HP15_3303 0.61 -0.4 3,461,783 + -0.6 3,461,783 + -1.2 3,461,820 + -0.2
Or see this region's nucleotide sequence