Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2887 and HP15_2888 overlap by 4 nucleotides HP15_2888 and HP15_2889 overlap by 4 nucleotides HP15_2889 and HP15_2890 are separated by 6 nucleotides HP15_2890 and HP15_2891 are separated by 127 nucleotides HP15_2891 and HP15_2892 are separated by 35 nucleotides
HP15_2887: HP15_2887 - iron-sulfur cluster binding protein, at 3,023,265 to 3,024,704
_2887
HP15_2888: HP15_2888 - protein containing DUF162, at 3,024,701 to 3,025,354
_2888
HP15_2889: HP15_2889 - membrane protein containing DUF6, transmembrane, at 3,025,351 to 3,026,304
_2889
HP15_2890: HP15_2890 - lactoylglutathione lyase, at 3,026,311 to 3,026,859
_2890
HP15_2891: HP15_2891 - hypothetical protein, at 3,026,987 to 3,027,118
_2891
HP15_2892: HP15_2892 - alkane 1-monooxygenase, at 3,027,154 to 3,028,239
_2892
Position (kb)
3025
3026
3027 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3024.353 kb on + strand, within HP15_2887 at 3024.367 kb on + strand, within HP15_2887 at 3024.367 kb on + strand, within HP15_2887 at 3024.367 kb on + strand, within HP15_2887 at 3024.367 kb on + strand, within HP15_2887 at 3024.403 kb on - strand, within HP15_2887 at 3024.670 kb on - strand at 3024.777 kb on + strand, within HP15_2888 at 3024.850 kb on + strand, within HP15_2888 at 3024.852 kb on + strand, within HP15_2888 at 3024.860 kb on + strand, within HP15_2888 at 3024.880 kb on + strand, within HP15_2888 at 3025.079 kb on - strand, within HP15_2888 at 3025.138 kb on + strand, within HP15_2888 at 3025.139 kb on - strand, within HP15_2888 at 3025.228 kb on - strand, within HP15_2888 at 3025.233 kb on - strand, within HP15_2888 at 3025.233 kb on - strand, within HP15_2888 at 3025.263 kb on + strand, within HP15_2888 at 3025.263 kb on + strand, within HP15_2888 at 3025.271 kb on - strand, within HP15_2888 at 3025.389 kb on + strand at 3025.396 kb on - strand at 3025.397 kb on - strand at 3025.433 kb on + strand at 3025.456 kb on - strand, within HP15_2889 at 3025.607 kb on + strand, within HP15_2889 at 3025.617 kb on + strand, within HP15_2889 at 3025.625 kb on - strand, within HP15_2889 at 3026.004 kb on + strand, within HP15_2889 at 3026.127 kb on + strand, within HP15_2889 at 3026.127 kb on + strand, within HP15_2889 at 3026.157 kb on + strand, within HP15_2889 at 3026.175 kb on - strand, within HP15_2889 at 3026.234 kb on - strand at 3026.307 kb on - strand at 3026.318 kb on + strand at 3026.473 kb on + strand, within HP15_2890 at 3026.473 kb on + strand, within HP15_2890 at 3026.486 kb on + strand, within HP15_2890 at 3026.511 kb on - strand, within HP15_2890 at 3026.599 kb on + strand, within HP15_2890 at 3026.599 kb on + strand, within HP15_2890 at 3026.607 kb on - strand, within HP15_2890 at 3026.607 kb on - strand, within HP15_2890 at 3026.607 kb on - strand, within HP15_2890 at 3026.607 kb on - strand, within HP15_2890 at 3026.743 kb on + strand, within HP15_2890 at 3026.886 kb on + strand at 3026.893 kb on + strand at 3026.893 kb on + strand at 3026.893 kb on + strand at 3026.977 kb on - strand at 3027.135 kb on + strand at 3027.135 kb on + strand at 3027.166 kb on + strand at 3027.276 kb on + strand, within HP15_2892 at 3027.284 kb on + strand, within HP15_2892
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,024,353 + HP15_2887 0.76 +0.2 3,024,367 + HP15_2887 0.77 -0.0 3,024,367 + HP15_2887 0.77 +0.4 3,024,367 + HP15_2887 0.77 +0.1 3,024,367 + HP15_2887 0.77 -0.6 3,024,403 - HP15_2887 0.79 -0.7 3,024,670 - +0.7 3,024,777 + HP15_2888 0.12 -1.5 3,024,850 + HP15_2888 0.23 -0.6 3,024,852 + HP15_2888 0.23 -2.3 3,024,860 + HP15_2888 0.24 -0.6 3,024,880 + HP15_2888 0.27 -0.0 3,025,079 - HP15_2888 0.58 +0.8 3,025,138 + HP15_2888 0.67 -1.0 3,025,139 - HP15_2888 0.67 +0.8 3,025,228 - HP15_2888 0.81 +0.2 3,025,233 - HP15_2888 0.81 -0.2 3,025,233 - HP15_2888 0.81 -1.0 3,025,263 + HP15_2888 0.86 -0.3 3,025,263 + HP15_2888 0.86 -0.6 3,025,271 - HP15_2888 0.87 +4.4 3,025,389 + -0.2 3,025,396 - -0.0 3,025,397 - +0.0 3,025,433 + -0.3 3,025,456 - HP15_2889 0.11 +0.3 3,025,607 + HP15_2889 0.27 -1.2 3,025,617 + HP15_2889 0.28 +0.3 3,025,625 - HP15_2889 0.29 +0.4 3,026,004 + HP15_2889 0.68 -0.0 3,026,127 + HP15_2889 0.81 -0.1 3,026,127 + HP15_2889 0.81 -0.3 3,026,157 + HP15_2889 0.84 +0.2 3,026,175 - HP15_2889 0.86 +1.4 3,026,234 - -0.3 3,026,307 - +0.6 3,026,318 + +0.5 3,026,473 + HP15_2890 0.30 -1.0 3,026,473 + HP15_2890 0.30 -0.2 3,026,486 + HP15_2890 0.32 -0.4 3,026,511 - HP15_2890 0.36 -0.5 3,026,599 + HP15_2890 0.52 -0.2 3,026,599 + HP15_2890 0.52 -0.9 3,026,607 - HP15_2890 0.54 +0.5 3,026,607 - HP15_2890 0.54 +0.5 3,026,607 - HP15_2890 0.54 +2.8 3,026,607 - HP15_2890 0.54 +0.8 3,026,743 + HP15_2890 0.79 +3.2 3,026,886 + +2.7 3,026,893 + +0.0 3,026,893 + -0.0 3,026,893 + +0.0 3,026,977 - -0.6 3,027,135 + -0.8 3,027,135 + -0.2 3,027,166 + +0.6 3,027,276 + HP15_2892 0.11 +0.9 3,027,284 + HP15_2892 0.12 +0.9
Or see this region's nucleotide sequence