Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_280 and HP15_281 are separated by 89 nucleotides HP15_281 and HP15_282 are separated by 6 nucleotides HP15_282 and HP15_283 are separated by 2 nucleotides
HP15_280: HP15_280 - putative oxygen-independent coproporphyrinogen III oxidase, at 271,304 to 272,386
_280
HP15_281: HP15_281 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 272,476 to 273,075
_281
HP15_282: HP15_282 - conserved hypothetical protein, secreted, at 273,082 to 273,537
_282
HP15_283: HP15_283 - methionine biosynthesis protein MetW, at 273,540 to 274,139
_283
Position (kb) 272
273
274 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3 at 271.536 kb on - strand, within HP15_280 at 271.536 kb on - strand, within HP15_280 at 271.830 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on + strand, within HP15_280 at 271.880 kb on - strand, within HP15_280 at 271.880 kb on - strand, within HP15_280 at 271.898 kb on - strand, within HP15_280 at 272.062 kb on - strand, within HP15_280 at 272.168 kb on + strand, within HP15_280 at 272.233 kb on - strand, within HP15_280 at 272.395 kb on - strand at 272.396 kb on - strand at 272.479 kb on + strand at 272.486 kb on + strand at 272.636 kb on - strand, within HP15_281 at 272.636 kb on - strand, within HP15_281 at 272.654 kb on - strand, within HP15_281 at 272.716 kb on + strand, within HP15_281 at 272.790 kb on - strand, within HP15_281 at 273.079 kb on + strand at 273.087 kb on - strand at 273.104 kb on - strand at 273.105 kb on - strand at 273.134 kb on - strand, within HP15_282 at 273.282 kb on - strand, within HP15_282 at 273.350 kb on + strand, within HP15_282 at 273.354 kb on - strand, within HP15_282 at 273.379 kb on - strand, within HP15_282 at 273.404 kb on + strand, within HP15_282 at 273.409 kb on + strand, within HP15_282 at 273.417 kb on - strand, within HP15_282 at 273.417 kb on - strand, within HP15_282 at 273.417 kb on - strand, within HP15_282 at 273.419 kb on + strand, within HP15_282 at 273.419 kb on + strand, within HP15_282 at 273.422 kb on - strand, within HP15_282 at 273.428 kb on + strand, within HP15_282 at 273.434 kb on - strand, within HP15_282 at 273.436 kb on - strand, within HP15_282 at 273.483 kb on - strand, within HP15_282 at 273.701 kb on + strand, within HP15_283 at 273.709 kb on - strand, within HP15_283 at 273.709 kb on - strand, within HP15_283 at 273.854 kb on - strand, within HP15_283 at 273.917 kb on + strand, within HP15_283 at 273.932 kb on + strand, within HP15_283 at 273.932 kb on + strand, within HP15_283
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 271,536 - HP15_280 0.21 +0.4 271,536 - HP15_280 0.21 +0.2 271,830 + HP15_280 0.49 +0.8 271,880 + HP15_280 0.53 +0.5 271,880 + HP15_280 0.53 -1.2 271,880 + HP15_280 0.53 +1.3 271,880 + HP15_280 0.53 +1.2 271,880 - HP15_280 0.53 -0.8 271,880 - HP15_280 0.53 +0.9 271,898 - HP15_280 0.55 -0.3 272,062 - HP15_280 0.70 -0.2 272,168 + HP15_280 0.80 +0.2 272,233 - HP15_280 0.86 -0.2 272,395 - +0.5 272,396 - +0.2 272,479 + +0.4 272,486 + +1.6 272,636 - HP15_281 0.27 -0.2 272,636 - HP15_281 0.27 +0.1 272,654 - HP15_281 0.30 +0.8 272,716 + HP15_281 0.40 +0.4 272,790 - HP15_281 0.52 -0.2 273,079 + +0.9 273,087 - -0.7 273,104 - -1.5 273,105 - -0.4 273,134 - HP15_282 0.11 -0.0 273,282 - HP15_282 0.44 +0.1 273,350 + HP15_282 0.59 -0.9 273,354 - HP15_282 0.60 +0.8 273,379 - HP15_282 0.65 -0.2 273,404 + HP15_282 0.71 +0.1 273,409 + HP15_282 0.72 +0.0 273,417 - HP15_282 0.73 -0.2 273,417 - HP15_282 0.73 +0.0 273,417 - HP15_282 0.73 +0.4 273,419 + HP15_282 0.74 -0.4 273,419 + HP15_282 0.74 +3.4 273,422 - HP15_282 0.75 +1.4 273,428 + HP15_282 0.76 +0.6 273,434 - HP15_282 0.77 +0.4 273,436 - HP15_282 0.78 +0.4 273,483 - HP15_282 0.88 +0.2 273,701 + HP15_283 0.27 -0.6 273,709 - HP15_283 0.28 +0.4 273,709 - HP15_283 0.28 -0.1 273,854 - HP15_283 0.52 -6.4 273,917 + HP15_283 0.63 +1.4 273,932 + HP15_283 0.65 -0.2 273,932 + HP15_283 0.65 +1.2
Or see this region's nucleotide sequence