Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2732 and HP15_2733 are separated by 200 nucleotides HP15_2733 and HP15_2734 overlap by 26 nucleotides
HP15_2732: HP15_2732 - drug resistance transporter, Bcr/CflA subfamily, at 2,883,896 to 2,885,089
_2732
HP15_2733: HP15_2733 - protein containing sulphatase-modifying factor domain, at 2,885,290 to 2,887,350
_2733
HP15_2734: HP15_2734 - conserved hypothetical protein, at 2,887,325 to 2,888,482
_2734
Position (kb)
2885
2886
2887
2888 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2884.368 kb on - strand, within HP15_2732 at 2884.368 kb on - strand, within HP15_2732 at 2884.368 kb on - strand, within HP15_2732 at 2884.437 kb on + strand, within HP15_2732 at 2884.573 kb on + strand, within HP15_2732 at 2884.671 kb on + strand, within HP15_2732 at 2884.783 kb on + strand, within HP15_2732 at 2884.791 kb on - strand, within HP15_2732 at 2884.844 kb on - strand, within HP15_2732 at 2884.899 kb on + strand, within HP15_2732 at 2884.985 kb on + strand at 2884.988 kb on - strand at 2884.993 kb on - strand at 2884.993 kb on - strand at 2884.993 kb on - strand at 2884.993 kb on - strand at 2884.993 kb on - strand at 2884.993 kb on - strand at 2885.155 kb on + strand at 2885.267 kb on - strand at 2885.525 kb on + strand, within HP15_2733 at 2885.611 kb on - strand, within HP15_2733 at 2885.611 kb on - strand, within HP15_2733 at 2885.615 kb on + strand, within HP15_2733 at 2885.740 kb on - strand, within HP15_2733 at 2885.835 kb on - strand, within HP15_2733 at 2885.859 kb on + strand, within HP15_2733 at 2885.931 kb on + strand, within HP15_2733 at 2885.931 kb on + strand, within HP15_2733 at 2885.931 kb on + strand, within HP15_2733 at 2885.939 kb on - strand, within HP15_2733 at 2885.939 kb on - strand, within HP15_2733 at 2885.939 kb on - strand, within HP15_2733 at 2885.985 kb on + strand, within HP15_2733 at 2885.985 kb on + strand, within HP15_2733 at 2886.017 kb on - strand, within HP15_2733 at 2886.019 kb on + strand, within HP15_2733 at 2886.167 kb on + strand, within HP15_2733 at 2886.295 kb on + strand, within HP15_2733 at 2886.389 kb on - strand, within HP15_2733 at 2886.671 kb on - strand, within HP15_2733 at 2886.751 kb on + strand, within HP15_2733 at 2886.751 kb on + strand, within HP15_2733 at 2886.753 kb on - strand, within HP15_2733 at 2886.759 kb on - strand, within HP15_2733 at 2886.782 kb on - strand, within HP15_2733 at 2886.877 kb on - strand, within HP15_2733 at 2886.899 kb on - strand, within HP15_2733 at 2886.918 kb on + strand, within HP15_2733 at 2886.994 kb on - strand, within HP15_2733 at 2887.020 kb on - strand, within HP15_2733 at 2887.079 kb on + strand, within HP15_2733 at 2887.126 kb on + strand, within HP15_2733 at 2887.134 kb on - strand, within HP15_2733 at 2887.134 kb on - strand, within HP15_2733 at 2887.212 kb on - strand at 2887.335 kb on - strand at 2887.362 kb on - strand at 2887.476 kb on - strand, within HP15_2734 at 2887.623 kb on - strand, within HP15_2734 at 2887.712 kb on - strand, within HP15_2734 at 2887.722 kb on - strand, within HP15_2734 at 2887.734 kb on - strand, within HP15_2734 at 2887.734 kb on - strand, within HP15_2734 at 2887.917 kb on + strand, within HP15_2734 at 2887.925 kb on - strand, within HP15_2734 at 2888.029 kb on + strand, within HP15_2734 at 2888.029 kb on + strand, within HP15_2734 at 2888.037 kb on - strand, within HP15_2734 at 2888.148 kb on + strand, within HP15_2734 at 2888.181 kb on - strand, within HP15_2734 at 2888.261 kb on - strand, within HP15_2734 at 2888.345 kb on - strand, within HP15_2734
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,884,368 - HP15_2732 0.40 -0.8 2,884,368 - HP15_2732 0.40 -0.5 2,884,368 - HP15_2732 0.40 +0.0 2,884,437 + HP15_2732 0.45 +0.1 2,884,573 + HP15_2732 0.57 +3.4 2,884,671 + HP15_2732 0.65 +0.2 2,884,783 + HP15_2732 0.74 +2.1 2,884,791 - HP15_2732 0.75 -0.7 2,884,844 - HP15_2732 0.79 +0.0 2,884,899 + HP15_2732 0.84 +1.6 2,884,985 + +2.2 2,884,988 - +0.4 2,884,993 - +0.8 2,884,993 - -0.5 2,884,993 - +0.4 2,884,993 - +0.6 2,884,993 - -1.2 2,884,993 - -0.6 2,885,155 + +4.8 2,885,267 - -2.2 2,885,525 + HP15_2733 0.11 -3.2 2,885,611 - HP15_2733 0.16 -2.8 2,885,611 - HP15_2733 0.16 -4.0 2,885,615 + HP15_2733 0.16 -3.5 2,885,740 - HP15_2733 0.22 -2.7 2,885,835 - HP15_2733 0.26 -0.9 2,885,859 + HP15_2733 0.28 -3.4 2,885,931 + HP15_2733 0.31 -2.0 2,885,931 + HP15_2733 0.31 -2.3 2,885,931 + HP15_2733 0.31 -1.8 2,885,939 - HP15_2733 0.31 -1.6 2,885,939 - HP15_2733 0.31 -1.7 2,885,939 - HP15_2733 0.31 -1.3 2,885,985 + HP15_2733 0.34 -1.9 2,885,985 + HP15_2733 0.34 -2.8 2,886,017 - HP15_2733 0.35 -1.8 2,886,019 + HP15_2733 0.35 -1.5 2,886,167 + HP15_2733 0.43 +1.2 2,886,295 + HP15_2733 0.49 -1.2 2,886,389 - HP15_2733 0.53 -3.5 2,886,671 - HP15_2733 0.67 +2.0 2,886,751 + HP15_2733 0.71 -2.1 2,886,751 + HP15_2733 0.71 -2.8 2,886,753 - HP15_2733 0.71 -2.5 2,886,759 - HP15_2733 0.71 -2.3 2,886,782 - HP15_2733 0.72 -2.2 2,886,877 - HP15_2733 0.77 +0.4 2,886,899 - HP15_2733 0.78 -2.8 2,886,918 + HP15_2733 0.79 -3.0 2,886,994 - HP15_2733 0.83 -1.9 2,887,020 - HP15_2733 0.84 -1.9 2,887,079 + HP15_2733 0.87 -1.2 2,887,126 + HP15_2733 0.89 -1.2 2,887,134 - HP15_2733 0.89 -2.8 2,887,134 - HP15_2733 0.89 -1.2 2,887,212 - -1.8 2,887,335 - -3.0 2,887,362 - -1.3 2,887,476 - HP15_2734 0.13 +0.0 2,887,623 - HP15_2734 0.26 -0.4 2,887,712 - HP15_2734 0.33 -0.6 2,887,722 - HP15_2734 0.34 -0.3 2,887,734 - HP15_2734 0.35 +0.0 2,887,734 - HP15_2734 0.35 +0.2 2,887,917 + HP15_2734 0.51 +0.1 2,887,925 - HP15_2734 0.52 +0.9 2,888,029 + HP15_2734 0.61 +0.4 2,888,029 + HP15_2734 0.61 -0.8 2,888,037 - HP15_2734 0.61 +0.2 2,888,148 + HP15_2734 0.71 -0.5 2,888,181 - HP15_2734 0.74 -0.2 2,888,261 - HP15_2734 0.81 -1.2 2,888,345 - HP15_2734 0.88 -0.9
Or see this region's nucleotide sequence