Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2722 and HP15_2723 are separated by 326 nucleotides HP15_2723 and HP15_2724 are separated by 74 nucleotides HP15_2724 and HP15_2725 are separated by 9 nucleotides HP15_2725 and HP15_2726 are separated by 47 nucleotides
HP15_2722: HP15_2722 - polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein, at 2,875,434 to 2,876,081
_2722
HP15_2723: HP15_2723 - thioredoxin, at 2,876,408 to 2,876,791
_2723
HP15_2724: HP15_2724 - short-chain dehydrogenase/reductase SDR, at 2,876,866 to 2,877,726
_2724
HP15_2725: HP15_2725 - conserved hypothetical protein, at 2,877,736 to 2,878,119
_2725
HP15_2726: HP15_2726 - abortive infection protein-like protein, at 2,878,167 to 2,878,976
_2726
Position (kb)
2876
2877
2878 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2875.936 kb on + strand, within HP15_2722 at 2875.941 kb on + strand, within HP15_2722 at 2875.994 kb on - strand, within HP15_2722 at 2876.146 kb on - strand at 2876.331 kb on + strand at 2876.418 kb on + strand at 2876.418 kb on + strand at 2876.426 kb on - strand at 2876.473 kb on - strand, within HP15_2723 at 2876.544 kb on + strand, within HP15_2723 at 2876.551 kb on - strand, within HP15_2723 at 2876.552 kb on - strand, within HP15_2723 at 2876.594 kb on + strand, within HP15_2723 at 2876.594 kb on + strand, within HP15_2723 at 2876.642 kb on + strand, within HP15_2723 at 2876.646 kb on - strand, within HP15_2723 at 2876.695 kb on - strand, within HP15_2723 at 2876.705 kb on + strand, within HP15_2723 at 2876.865 kb on - strand at 2876.884 kb on + strand at 2877.012 kb on - strand, within HP15_2724 at 2877.095 kb on + strand, within HP15_2724 at 2877.097 kb on - strand, within HP15_2724 at 2877.185 kb on - strand, within HP15_2724 at 2877.209 kb on + strand, within HP15_2724 at 2877.217 kb on - strand, within HP15_2724 at 2877.217 kb on - strand, within HP15_2724 at 2877.232 kb on - strand, within HP15_2724 at 2877.273 kb on + strand, within HP15_2724 at 2877.286 kb on + strand, within HP15_2724 at 2877.286 kb on + strand, within HP15_2724 at 2877.286 kb on + strand, within HP15_2724 at 2877.294 kb on - strand, within HP15_2724 at 2877.330 kb on - strand, within HP15_2724 at 2877.385 kb on + strand, within HP15_2724 at 2877.420 kb on + strand, within HP15_2724 at 2877.439 kb on + strand, within HP15_2724 at 2877.439 kb on + strand, within HP15_2724 at 2877.447 kb on - strand, within HP15_2724 at 2877.474 kb on + strand, within HP15_2724 at 2877.487 kb on - strand, within HP15_2724 at 2877.509 kb on - strand, within HP15_2724 at 2877.513 kb on - strand, within HP15_2724 at 2877.571 kb on - strand, within HP15_2724 at 2877.662 kb on + strand at 2877.712 kb on - strand at 2877.828 kb on + strand, within HP15_2725 at 2877.836 kb on - strand, within HP15_2725 at 2877.978 kb on + strand, within HP15_2725 at 2878.002 kb on + strand, within HP15_2725 at 2878.079 kb on - strand, within HP15_2725 at 2878.112 kb on - strand at 2878.173 kb on - strand at 2878.260 kb on + strand, within HP15_2726 at 2878.290 kb on + strand, within HP15_2726 at 2878.340 kb on - strand, within HP15_2726 at 2878.354 kb on - strand, within HP15_2726 at 2878.449 kb on + strand, within HP15_2726 at 2878.471 kb on + strand, within HP15_2726 at 2878.471 kb on + strand, within HP15_2726 at 2878.471 kb on + strand, within HP15_2726 at 2878.483 kb on - strand, within HP15_2726 at 2878.499 kb on + strand, within HP15_2726 at 2878.543 kb on - strand, within HP15_2726 at 2878.558 kb on - strand, within HP15_2726 at 2878.575 kb on - strand, within HP15_2726 at 2878.636 kb on + strand, within HP15_2726 at 2878.691 kb on + strand, within HP15_2726 at 2878.710 kb on - strand, within HP15_2726
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,875,936 + HP15_2722 0.77 -0.2 2,875,941 + HP15_2722 0.78 -0.6 2,875,994 - HP15_2722 0.86 -0.4 2,876,146 - -0.6 2,876,331 + -0.4 2,876,418 + +0.2 2,876,418 + -0.4 2,876,426 - -0.8 2,876,473 - HP15_2723 0.17 +0.1 2,876,544 + HP15_2723 0.35 +0.4 2,876,551 - HP15_2723 0.37 +0.4 2,876,552 - HP15_2723 0.38 -1.5 2,876,594 + HP15_2723 0.48 +0.7 2,876,594 + HP15_2723 0.48 -0.1 2,876,642 + HP15_2723 0.61 +0.8 2,876,646 - HP15_2723 0.62 -0.5 2,876,695 - HP15_2723 0.75 +0.0 2,876,705 + HP15_2723 0.77 -1.1 2,876,865 - +0.2 2,876,884 + -0.9 2,877,012 - HP15_2724 0.17 -0.9 2,877,095 + HP15_2724 0.27 +0.8 2,877,097 - HP15_2724 0.27 +0.4 2,877,185 - HP15_2724 0.37 +0.6 2,877,209 + HP15_2724 0.40 +0.8 2,877,217 - HP15_2724 0.41 -0.4 2,877,217 - HP15_2724 0.41 +0.1 2,877,232 - HP15_2724 0.43 +0.3 2,877,273 + HP15_2724 0.47 -0.2 2,877,286 + HP15_2724 0.49 +0.0 2,877,286 + HP15_2724 0.49 +0.8 2,877,286 + HP15_2724 0.49 -0.2 2,877,294 - HP15_2724 0.50 +0.6 2,877,330 - HP15_2724 0.54 -0.4 2,877,385 + HP15_2724 0.60 -0.2 2,877,420 + HP15_2724 0.64 +0.8 2,877,439 + HP15_2724 0.67 -0.9 2,877,439 + HP15_2724 0.67 +0.0 2,877,447 - HP15_2724 0.67 -1.2 2,877,474 + HP15_2724 0.71 +0.7 2,877,487 - HP15_2724 0.72 +2.0 2,877,509 - HP15_2724 0.75 +0.5 2,877,513 - HP15_2724 0.75 +0.7 2,877,571 - HP15_2724 0.82 +0.4 2,877,662 + -1.8 2,877,712 - -0.3 2,877,828 + HP15_2725 0.24 -1.5 2,877,836 - HP15_2725 0.26 +0.8 2,877,978 + HP15_2725 0.63 -0.5 2,878,002 + HP15_2725 0.69 -2.0 2,878,079 - HP15_2725 0.89 +1.6 2,878,112 - -0.8 2,878,173 - -0.5 2,878,260 + HP15_2726 0.11 -1.2 2,878,290 + HP15_2726 0.15 +0.8 2,878,340 - HP15_2726 0.21 +0.2 2,878,354 - HP15_2726 0.23 +1.0 2,878,449 + HP15_2726 0.35 +0.8 2,878,471 + HP15_2726 0.38 +0.1 2,878,471 + HP15_2726 0.38 +0.1 2,878,471 + HP15_2726 0.38 -0.3 2,878,483 - HP15_2726 0.39 -0.4 2,878,499 + HP15_2726 0.41 -0.3 2,878,543 - HP15_2726 0.46 -0.4 2,878,558 - HP15_2726 0.48 -0.6 2,878,575 - HP15_2726 0.50 +0.4 2,878,636 + HP15_2726 0.58 +1.6 2,878,691 + HP15_2726 0.65 +0.2 2,878,710 - HP15_2726 0.67 -0.8
Or see this region's nucleotide sequence