Strain Fitness in Marinobacter adhaerens HP15 around HP15_2636

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2635 and HP15_2636 are separated by 148 nucleotidesHP15_2636 and HP15_2637 are separated by 117 nucleotides HP15_2635: HP15_2635 - transcriptional regulator, LysR-family protein, at 2,786,061 to 2,786,960 _2635 HP15_2636: HP15_2636 - conserved hypothetical protein, at 2,787,109 to 2,787,303 _2636 HP15_2637: HP15_2637 - long-chain-fatty-acid-CoA ligase, at 2,787,421 to 2,789,103 _2637 Position (kb) 2787 2788Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2786.115 kb on - strandat 2786.136 kb on + strandat 2786.220 kb on + strand, within HP15_2635at 2786.230 kb on - strand, within HP15_2635at 2786.275 kb on + strand, within HP15_2635at 2786.313 kb on - strand, within HP15_2635at 2786.350 kb on - strand, within HP15_2635at 2786.451 kb on + strand, within HP15_2635at 2786.613 kb on + strand, within HP15_2635at 2786.698 kb on + strand, within HP15_2635at 2786.715 kb on - strand, within HP15_2635at 2786.785 kb on + strand, within HP15_2635at 2786.830 kb on + strand, within HP15_2635at 2786.830 kb on + strand, within HP15_2635at 2786.867 kb on - strand, within HP15_2635at 2787.131 kb on + strand, within HP15_2636at 2787.165 kb on - strand, within HP15_2636at 2787.174 kb on + strand, within HP15_2636at 2787.419 kb on + strandat 2787.542 kb on + strandat 2787.550 kb on - strandat 2787.709 kb on - strand, within HP15_2637at 2787.748 kb on - strand, within HP15_2637at 2787.845 kb on + strand, within HP15_2637at 2787.853 kb on - strand, within HP15_2637at 2787.981 kb on + strand, within HP15_2637at 2788.001 kb on - strand, within HP15_2637at 2788.041 kb on - strand, within HP15_2637at 2788.041 kb on - strand, within HP15_2637at 2788.046 kb on - strand, within HP15_2637at 2788.081 kb on + strand, within HP15_2637at 2788.087 kb on - strand, within HP15_2637at 2788.156 kb on + strand, within HP15_2637at 2788.156 kb on + strand, within HP15_2637at 2788.156 kb on + strand, within HP15_2637at 2788.164 kb on - strand, within HP15_2637at 2788.164 kb on - strand, within HP15_2637at 2788.283 kb on + strand, within HP15_2637

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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2,786,115 - +0.8
2,786,136 + +0.9
2,786,220 + HP15_2635 0.18 -0.2
2,786,230 - HP15_2635 0.19 +0.2
2,786,275 + HP15_2635 0.24 +0.1
2,786,313 - HP15_2635 0.28 -0.6
2,786,350 - HP15_2635 0.32 -0.6
2,786,451 + HP15_2635 0.43 -0.6
2,786,613 + HP15_2635 0.61 +2.8
2,786,698 + HP15_2635 0.71 -0.1
2,786,715 - HP15_2635 0.73 +3.9
2,786,785 + HP15_2635 0.80 +0.4
2,786,830 + HP15_2635 0.85 -0.9
2,786,830 + HP15_2635 0.85 +0.1
2,786,867 - HP15_2635 0.90 +0.3
2,787,131 + HP15_2636 0.11 -3.2
2,787,165 - HP15_2636 0.29 +4.6
2,787,174 + HP15_2636 0.33 -2.6
2,787,419 + +0.5
2,787,542 + +0.2
2,787,550 - +0.2
2,787,709 - HP15_2637 0.17 -0.8
2,787,748 - HP15_2637 0.19 -0.2
2,787,845 + HP15_2637 0.25 -3.5
2,787,853 - HP15_2637 0.26 -0.1
2,787,981 + HP15_2637 0.33 -0.1
2,788,001 - HP15_2637 0.34 +0.2
2,788,041 - HP15_2637 0.37 +0.2
2,788,041 - HP15_2637 0.37 -0.0
2,788,046 - HP15_2637 0.37 -0.4
2,788,081 + HP15_2637 0.39 -0.2
2,788,087 - HP15_2637 0.40 -0.4
2,788,156 + HP15_2637 0.44 -0.4
2,788,156 + HP15_2637 0.44 -0.4
2,788,156 + HP15_2637 0.44 +0.5
2,788,164 - HP15_2637 0.44 -0.7
2,788,164 - HP15_2637 0.44 -0.3
2,788,283 + HP15_2637 0.51 -0.5

Or see this region's nucleotide sequence