Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2581 and HP15_2582 overlap by 1 nucleotides HP15_2582 and HP15_2583 overlap by 4 nucleotides HP15_2583 and HP15_2584 overlap by 1 nucleotides HP15_2584 and HP15_2585 overlap by 4 nucleotides HP15_2585 and HP15_2586 are separated by 41 nucleotides
HP15_2581: HP15_2581 - monovalent cation/H+ antiporter subunit A, at 2,730,699 to 2,733,500
_2581
HP15_2582: HP15_2582 - NADH-ubiquinone oxidoreductase, chain 4L, at 2,733,500 to 2,733,868
_2582
HP15_2583: HP15_2583 - monovalent cation/H+ antiporter subunit D, at 2,733,865 to 2,735,382
_2583
HP15_2584: HP15_2584 - pH adaption potassium efflux system protein PhaE, at 2,735,382 to 2,735,870
_2584
HP15_2585: HP15_2585 - multiple resistance and pH regulation protein F, at 2,735,867 to 2,736,136
_2585
HP15_2586: HP15_2586 - monovalent cation/H+ antiporter subunit G, at 2,736,178 to 2,736,510
_2586
Position (kb)
2733
2734
2735
2736 Strain fitness (log2 ratio)
-1
0
1
2 at 2733.259 kb on + strand at 2733.259 kb on + strand at 2733.421 kb on + strand at 2733.448 kb on - strand at 2733.448 kb on - strand at 2733.459 kb on + strand at 2733.520 kb on + strand at 2733.672 kb on + strand, within HP15_2582 at 2733.710 kb on + strand, within HP15_2582 at 2733.720 kb on - strand, within HP15_2582 at 2733.728 kb on - strand, within HP15_2582 at 2733.922 kb on - strand at 2733.959 kb on + strand at 2734.328 kb on - strand, within HP15_2583 at 2734.422 kb on + strand, within HP15_2583 at 2734.525 kb on - strand, within HP15_2583 at 2734.537 kb on + strand, within HP15_2583 at 2734.555 kb on + strand, within HP15_2583 at 2734.837 kb on - strand, within HP15_2583 at 2735.055 kb on + strand, within HP15_2583 at 2735.064 kb on - strand, within HP15_2583 at 2735.074 kb on + strand, within HP15_2583 at 2735.087 kb on + strand, within HP15_2583 at 2735.118 kb on + strand, within HP15_2583 at 2735.209 kb on - strand, within HP15_2583 at 2735.319 kb on - strand at 2735.333 kb on - strand at 2735.364 kb on + strand at 2735.404 kb on + strand at 2735.419 kb on + strand at 2735.478 kb on + strand, within HP15_2584 at 2735.564 kb on - strand, within HP15_2584 at 2735.619 kb on - strand, within HP15_2584 at 2735.676 kb on - strand, within HP15_2584 at 2735.915 kb on - strand, within HP15_2585 at 2735.984 kb on + strand, within HP15_2585 at 2735.992 kb on - strand, within HP15_2585 at 2736.011 kb on + strand, within HP15_2585 at 2736.121 kb on - strand at 2736.131 kb on - strand at 2736.319 kb on - strand, within HP15_2586 at 2736.321 kb on - strand, within HP15_2586 at 2736.331 kb on + strand, within HP15_2586 at 2736.367 kb on - strand, within HP15_2586
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,733,259 + +0.6 2,733,259 + +1.0 2,733,421 + +1.3 2,733,448 - +0.6 2,733,448 - +2.0 2,733,459 + +0.8 2,733,520 + +0.5 2,733,672 + HP15_2582 0.47 +1.2 2,733,710 + HP15_2582 0.57 +1.8 2,733,720 - HP15_2582 0.60 +2.1 2,733,728 - HP15_2582 0.62 +1.0 2,733,922 - -1.2 2,733,959 + +0.7 2,734,328 - HP15_2583 0.31 +2.2 2,734,422 + HP15_2583 0.37 +2.4 2,734,525 - HP15_2583 0.43 -0.0 2,734,537 + HP15_2583 0.44 +1.1 2,734,555 + HP15_2583 0.45 +1.0 2,734,837 - HP15_2583 0.64 +1.9 2,735,055 + HP15_2583 0.78 +1.1 2,735,064 - HP15_2583 0.79 +1.2 2,735,074 + HP15_2583 0.80 +1.2 2,735,087 + HP15_2583 0.81 +1.4 2,735,118 + HP15_2583 0.83 +2.3 2,735,209 - HP15_2583 0.89 +2.6 2,735,319 - +0.2 2,735,333 - +1.2 2,735,364 + +2.1 2,735,404 + +1.1 2,735,419 + +2.1 2,735,478 + HP15_2584 0.20 +1.1 2,735,564 - HP15_2584 0.37 +1.0 2,735,619 - HP15_2584 0.48 +1.6 2,735,676 - HP15_2584 0.60 -1.6 2,735,915 - HP15_2585 0.18 +1.9 2,735,984 + HP15_2585 0.43 +1.7 2,735,992 - HP15_2585 0.46 +0.6 2,736,011 + HP15_2585 0.53 +2.5 2,736,121 - +0.8 2,736,131 - +1.7 2,736,319 - HP15_2586 0.42 +1.1 2,736,321 - HP15_2586 0.43 +1.4 2,736,331 + HP15_2586 0.46 +0.4 2,736,367 - HP15_2586 0.57 -1.2
Or see this region's nucleotide sequence