Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2557 and HP15_2558 overlap by 23 nucleotides HP15_2558 and HP15_2559 are separated by 13 nucleotides HP15_2559 and HP15_2560 are separated by 171 nucleotides
HP15_2557: HP15_2557 - alpha/beta hydrolase fold-3 domain protein, at 2,703,784 to 2,704,677
_2557
HP15_2558: HP15_2558 - putative nuclease, at 2,704,655 to 2,704,909
_2558
HP15_2559: HP15_2559 - membrane protein containing DUF6, transmembrane, at 2,704,923 to 2,705,828
_2559
HP15_2560: HP15_2560 - TRAP dicarboxylate transporter- DctP subunit, at 2,706,000 to 2,707,103
_2560
Position (kb)
2704
2705
2706 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2703.923 kb on - strand, within HP15_2557 at 2704.021 kb on + strand, within HP15_2557 at 2704.050 kb on - strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.462 kb on + strand, within HP15_2557 at 2704.472 kb on + strand, within HP15_2557 at 2704.484 kb on - strand, within HP15_2557 at 2704.560 kb on + strand, within HP15_2557 at 2704.567 kb on + strand, within HP15_2557 at 2704.691 kb on - strand, within HP15_2558 at 2704.691 kb on - strand, within HP15_2558 at 2704.701 kb on + strand, within HP15_2558 at 2704.939 kb on - strand at 2705.024 kb on - strand, within HP15_2559 at 2705.029 kb on - strand, within HP15_2559 at 2705.034 kb on - strand, within HP15_2559 at 2705.086 kb on + strand, within HP15_2559 at 2705.162 kb on + strand, within HP15_2559 at 2705.306 kb on + strand, within HP15_2559 at 2705.323 kb on + strand, within HP15_2559 at 2705.351 kb on + strand, within HP15_2559 at 2705.390 kb on - strand, within HP15_2559 at 2705.430 kb on + strand, within HP15_2559 at 2705.493 kb on + strand, within HP15_2559 at 2705.512 kb on + strand, within HP15_2559 at 2705.587 kb on + strand, within HP15_2559 at 2705.668 kb on - strand, within HP15_2559 at 2705.778 kb on + strand at 2705.786 kb on - strand at 2705.931 kb on - strand at 2706.059 kb on - strand at 2706.085 kb on - strand at 2706.127 kb on + strand, within HP15_2560 at 2706.306 kb on + strand, within HP15_2560 at 2706.379 kb on - strand, within HP15_2560 at 2706.419 kb on - strand, within HP15_2560 at 2706.421 kb on + strand, within HP15_2560 at 2706.429 kb on - strand, within HP15_2560 at 2706.502 kb on - strand, within HP15_2560 at 2706.564 kb on + strand, within HP15_2560 at 2706.592 kb on + strand, within HP15_2560 at 2706.607 kb on + strand, within HP15_2560 at 2706.646 kb on - strand, within HP15_2560 at 2706.667 kb on - strand, within HP15_2560 at 2706.720 kb on + strand, within HP15_2560 at 2706.728 kb on - strand, within HP15_2560 at 2706.728 kb on - strand, within HP15_2560 at 2706.738 kb on - strand, within HP15_2560
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,703,923 - HP15_2557 0.16 +0.5 2,704,021 + HP15_2557 0.27 -0.7 2,704,050 - HP15_2557 0.30 -0.2 2,704,313 + HP15_2557 0.59 -0.1 2,704,313 + HP15_2557 0.59 +0.6 2,704,313 + HP15_2557 0.59 +0.2 2,704,321 - HP15_2557 0.60 -1.1 2,704,321 - HP15_2557 0.60 -0.2 2,704,462 + HP15_2557 0.76 +1.4 2,704,472 + HP15_2557 0.77 +0.0 2,704,484 - HP15_2557 0.78 -1.1 2,704,560 + HP15_2557 0.87 -0.8 2,704,567 + HP15_2557 0.88 +0.3 2,704,691 - HP15_2558 0.14 -0.5 2,704,691 - HP15_2558 0.14 +3.6 2,704,701 + HP15_2558 0.18 +0.9 2,704,939 - +0.8 2,705,024 - HP15_2559 0.11 +1.6 2,705,029 - HP15_2559 0.12 +2.3 2,705,034 - HP15_2559 0.12 +1.2 2,705,086 + HP15_2559 0.18 +1.0 2,705,162 + HP15_2559 0.26 +1.5 2,705,306 + HP15_2559 0.42 +1.5 2,705,323 + HP15_2559 0.44 +0.8 2,705,351 + HP15_2559 0.47 +1.3 2,705,390 - HP15_2559 0.52 +1.8 2,705,430 + HP15_2559 0.56 +2.4 2,705,493 + HP15_2559 0.63 +1.6 2,705,512 + HP15_2559 0.65 +1.6 2,705,587 + HP15_2559 0.73 +1.0 2,705,668 - HP15_2559 0.82 +1.5 2,705,778 + +1.1 2,705,786 - +2.1 2,705,931 - -4.0 2,706,059 - -2.9 2,706,085 - -2.8 2,706,127 + HP15_2560 0.12 -0.8 2,706,306 + HP15_2560 0.28 -1.5 2,706,379 - HP15_2560 0.34 -1.2 2,706,419 - HP15_2560 0.38 -1.2 2,706,421 + HP15_2560 0.38 -1.0 2,706,429 - HP15_2560 0.39 +0.3 2,706,502 - HP15_2560 0.45 -0.4 2,706,564 + HP15_2560 0.51 +2.4 2,706,592 + HP15_2560 0.54 -1.5 2,706,607 + HP15_2560 0.55 +0.4 2,706,646 - HP15_2560 0.59 -0.6 2,706,667 - HP15_2560 0.60 +0.1 2,706,720 + HP15_2560 0.65 -0.2 2,706,728 - HP15_2560 0.66 +0.5 2,706,728 - HP15_2560 0.66 -0.1 2,706,738 - HP15_2560 0.67 -0.4
Or see this region's nucleotide sequence