Strain Fitness in Marinobacter adhaerens HP15 around HP15_2451
Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cisplatin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,589,334 | + | HP15_2450 | 0.76 | +2.4 | |
2,589,342 | - | HP15_2450 | 0.76 | +1.3 | |
2,589,482 | + | HP15_2450 | 0.80 | +0.6 | |
2,589,484 | + | HP15_2450 | 0.80 | +1.6 | |
2,589,557 | + | HP15_2450 | 0.82 | +1.4 | |
2,589,557 | + | HP15_2450 | 0.82 | -0.0 | |
2,589,668 | + | HP15_2450 | 0.85 | +0.2 | |
2,589,813 | + | HP15_2450 | 0.89 | +2.0 | |
2,589,813 | + | HP15_2450 | 0.89 | +1.2 | |
2,589,866 | - | +0.7 | |||
2,589,876 | - | +1.2 | |||
2,590,243 | - | +0.4 | |||
2,590,279 | - | -0.8 | |||
2,590,284 | - | +1.8 | |||
2,590,421 | + | HP15_2451 | 0.10 | +1.0 | |
2,590,537 | + | HP15_2451 | 0.18 | -0.3 | |
2,590,850 | - | HP15_2451 | 0.39 | -3.2 | |
2,590,903 | - | HP15_2451 | 0.43 | -1.9 | |
2,591,166 | - | HP15_2451 | 0.61 | -1.4 | |
2,591,404 | + | HP15_2451 | 0.77 | -2.7 | |
2,591,412 | - | HP15_2451 | 0.77 | -0.8 | |
2,592,003 | - | HP15_2452 | 0.42 | +1.0 | |
2,592,003 | - | HP15_2452 | 0.42 | -0.7 | |
2,592,008 | - | HP15_2452 | 0.43 | -1.0 | |
2,592,031 | + | HP15_2452 | 0.47 | +0.3 | |
2,592,073 | + | HP15_2452 | 0.54 | -0.8 | |
2,592,179 | - | HP15_2452 | 0.71 | -0.1 | |
2,592,205 | + | HP15_2452 | 0.76 | -0.8 | |
2,592,360 | - | +1.2 |
Or see this region's nucleotide sequence