Experiment: m.b. Zinc 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c24210 and PGA1_c24220 are separated by 104 nucleotides PGA1_c24220 and PGA1_c24230 are separated by 110 nucleotides
PGA1_c24210: PGA1_c24210 - putative phosphate transporter, at 2,525,591 to 2,527,072
_c24210
PGA1_c24220: PGA1_c24220 - ornithine carbamoyltransferase ArgF, at 2,527,177 to 2,528,103
_c24220
PGA1_c24230: PGA1_c24230 - acetylornithine aminotransferase ArgD, at 2,528,214 to 2,529,398
_c24230
Position (kb)
2527
2528
2529 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2526.341 kb on - strand, within PGA1_c24210 at 2526.361 kb on - strand, within PGA1_c24210 at 2526.402 kb on + strand, within PGA1_c24210 at 2526.402 kb on - strand, within PGA1_c24210 at 2526.405 kb on - strand, within PGA1_c24210 at 2526.429 kb on - strand, within PGA1_c24210 at 2526.445 kb on + strand, within PGA1_c24210 at 2526.445 kb on + strand, within PGA1_c24210 at 2526.465 kb on - strand, within PGA1_c24210 at 2526.502 kb on - strand, within PGA1_c24210 at 2526.507 kb on - strand, within PGA1_c24210 at 2526.527 kb on - strand, within PGA1_c24210 at 2526.560 kb on - strand, within PGA1_c24210 at 2526.562 kb on + strand, within PGA1_c24210 at 2526.629 kb on - strand, within PGA1_c24210 at 2526.645 kb on + strand, within PGA1_c24210 at 2526.685 kb on + strand, within PGA1_c24210 at 2526.742 kb on + strand, within PGA1_c24210 at 2526.744 kb on - strand, within PGA1_c24210 at 2526.801 kb on + strand, within PGA1_c24210 at 2526.809 kb on - strand, within PGA1_c24210 at 2526.809 kb on - strand, within PGA1_c24210 at 2526.865 kb on - strand, within PGA1_c24210 at 2526.865 kb on - strand, within PGA1_c24210 at 2526.911 kb on - strand, within PGA1_c24210 at 2526.921 kb on - strand, within PGA1_c24210 at 2527.025 kb on - strand at 2527.042 kb on - strand at 2527.091 kb on + strand at 2527.165 kb on + strand at 2527.170 kb on + strand at 2527.400 kb on - strand, within PGA1_c24220 at 2527.561 kb on - strand, within PGA1_c24220 at 2527.662 kb on + strand, within PGA1_c24220 at 2527.670 kb on - strand, within PGA1_c24220 at 2527.845 kb on - strand, within PGA1_c24220 at 2528.008 kb on - strand, within PGA1_c24220 at 2528.008 kb on - strand, within PGA1_c24220 at 2528.025 kb on + strand at 2528.043 kb on + strand at 2528.069 kb on - strand at 2528.224 kb on + strand at 2528.242 kb on - strand at 2528.250 kb on - strand at 2528.303 kb on - strand at 2528.409 kb on + strand, within PGA1_c24230 at 2528.414 kb on + strand, within PGA1_c24230 at 2528.414 kb on + strand, within PGA1_c24230 at 2528.417 kb on - strand, within PGA1_c24230 at 2528.422 kb on - strand, within PGA1_c24230 at 2528.422 kb on - strand, within PGA1_c24230 at 2528.422 kb on - strand, within PGA1_c24230 at 2528.422 kb on - strand, within PGA1_c24230 at 2528.427 kb on - strand, within PGA1_c24230 at 2528.457 kb on + strand, within PGA1_c24230 at 2528.553 kb on - strand, within PGA1_c24230 at 2528.558 kb on - strand, within PGA1_c24230 at 2528.560 kb on - strand, within PGA1_c24230 at 2528.570 kb on - strand, within PGA1_c24230 at 2528.570 kb on - strand, within PGA1_c24230 at 2528.570 kb on - strand, within PGA1_c24230 at 2528.570 kb on - strand, within PGA1_c24230 at 2528.596 kb on - strand, within PGA1_c24230 at 2528.609 kb on + strand, within PGA1_c24230 at 2528.740 kb on + strand, within PGA1_c24230 at 2528.793 kb on - strand, within PGA1_c24230 at 2528.803 kb on + strand, within PGA1_c24230 at 2528.902 kb on - strand, within PGA1_c24230 at 2528.902 kb on - strand, within PGA1_c24230 at 2528.902 kb on - strand, within PGA1_c24230 at 2528.919 kb on + strand, within PGA1_c24230 at 2528.984 kb on + strand, within PGA1_c24230 at 2529.057 kb on - strand, within PGA1_c24230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.1 mM remove 2,526,341 - PGA1_c24210 0.51 +0.9 2,526,361 - PGA1_c24210 0.52 -0.1 2,526,402 + PGA1_c24210 0.55 -0.1 2,526,402 - PGA1_c24210 0.55 -0.2 2,526,405 - PGA1_c24210 0.55 +0.4 2,526,429 - PGA1_c24210 0.57 +1.3 2,526,445 + PGA1_c24210 0.58 -0.6 2,526,445 + PGA1_c24210 0.58 +1.1 2,526,465 - PGA1_c24210 0.59 +0.6 2,526,502 - PGA1_c24210 0.61 +0.2 2,526,507 - PGA1_c24210 0.62 +0.4 2,526,527 - PGA1_c24210 0.63 -0.9 2,526,560 - PGA1_c24210 0.65 +0.6 2,526,562 + PGA1_c24210 0.66 -1.2 2,526,629 - PGA1_c24210 0.70 -0.1 2,526,645 + PGA1_c24210 0.71 -0.9 2,526,685 + PGA1_c24210 0.74 -0.1 2,526,742 + PGA1_c24210 0.78 +1.5 2,526,744 - PGA1_c24210 0.78 +0.3 2,526,801 + PGA1_c24210 0.82 -1.0 2,526,809 - PGA1_c24210 0.82 +0.2 2,526,809 - PGA1_c24210 0.82 -0.2 2,526,865 - PGA1_c24210 0.86 +0.8 2,526,865 - PGA1_c24210 0.86 +2.3 2,526,911 - PGA1_c24210 0.89 +0.7 2,526,921 - PGA1_c24210 0.90 +0.0 2,527,025 - -0.5 2,527,042 - +0.1 2,527,091 + -0.1 2,527,165 + +1.5 2,527,170 + -0.2 2,527,400 - PGA1_c24220 0.24 +1.8 2,527,561 - PGA1_c24220 0.41 +0.3 2,527,662 + PGA1_c24220 0.52 +1.1 2,527,670 - PGA1_c24220 0.53 +1.6 2,527,845 - PGA1_c24220 0.72 +2.6 2,528,008 - PGA1_c24220 0.90 +0.6 2,528,008 - PGA1_c24220 0.90 +2.2 2,528,025 + +1.9 2,528,043 + -0.9 2,528,069 - +1.2 2,528,224 + +0.5 2,528,242 - -1.1 2,528,250 - +0.9 2,528,303 - +2.6 2,528,409 + PGA1_c24230 0.16 -0.9 2,528,414 + PGA1_c24230 0.17 +1.6 2,528,414 + PGA1_c24230 0.17 +0.8 2,528,417 - PGA1_c24230 0.17 +1.1 2,528,422 - PGA1_c24230 0.18 +1.2 2,528,422 - PGA1_c24230 0.18 +1.2 2,528,422 - PGA1_c24230 0.18 -0.9 2,528,422 - PGA1_c24230 0.18 +3.0 2,528,427 - PGA1_c24230 0.18 +2.1 2,528,457 + PGA1_c24230 0.21 -1.1 2,528,553 - PGA1_c24230 0.29 +0.4 2,528,558 - PGA1_c24230 0.29 +1.0 2,528,560 - PGA1_c24230 0.29 -0.4 2,528,570 - PGA1_c24230 0.30 +3.0 2,528,570 - PGA1_c24230 0.30 +0.6 2,528,570 - PGA1_c24230 0.30 +3.2 2,528,570 - PGA1_c24230 0.30 +2.1 2,528,596 - PGA1_c24230 0.32 +1.6 2,528,609 + PGA1_c24230 0.33 +1.8 2,528,740 + PGA1_c24230 0.44 +2.3 2,528,793 - PGA1_c24230 0.49 +1.0 2,528,803 + PGA1_c24230 0.50 +1.3 2,528,902 - PGA1_c24230 0.58 +0.4 2,528,902 - PGA1_c24230 0.58 +0.8 2,528,902 - PGA1_c24230 0.58 -0.9 2,528,919 + PGA1_c24230 0.59 +2.2 2,528,984 + PGA1_c24230 0.65 +1.1 2,529,057 - PGA1_c24230 0.71 +1.6
Or see this region's nucleotide sequence