Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2216 and HP15_2217 are separated by 100 nucleotides HP15_2217 and HP15_2218 are separated by 138 nucleotides HP15_2218 and HP15_2219 are separated by 4 nucleotides
HP15_2216: HP15_2216 - ribosomal protein L32p, at 2,333,729 to 2,333,908
_2216
HP15_2217: HP15_2217 - protein containing DUF177, at 2,334,009 to 2,334,563
_2217
HP15_2218: HP15_2218 - Maf-like protein, at 2,334,702 to 2,335,310
_2218
HP15_2219: HP15_2219 - family S49 unassigned peptidase, at 2,335,315 to 2,336,358
_2219
Position (kb)
2334
2335
2336 Strain fitness (log2 ratio)
-2
-1
0
1 at 2333.718 kb on - strand at 2334.605 kb on - strand at 2334.625 kb on + strand at 2334.818 kb on + strand, within HP15_2218 at 2334.925 kb on - strand, within HP15_2218 at 2334.950 kb on - strand, within HP15_2218 at 2334.950 kb on - strand, within HP15_2218 at 2334.950 kb on - strand, within HP15_2218 at 2334.950 kb on - strand, within HP15_2218 at 2335.000 kb on + strand, within HP15_2218 at 2335.006 kb on + strand, within HP15_2218 at 2335.016 kb on - strand, within HP15_2218 at 2335.180 kb on + strand, within HP15_2218 at 2335.180 kb on + strand, within HP15_2218 at 2335.180 kb on + strand, within HP15_2218 at 2335.190 kb on + strand, within HP15_2218 at 2335.212 kb on + strand, within HP15_2218 at 2335.417 kb on + strand at 2335.425 kb on + strand, within HP15_2219 at 2335.450 kb on - strand, within HP15_2219 at 2335.462 kb on + strand, within HP15_2219 at 2335.480 kb on - strand, within HP15_2219 at 2335.525 kb on - strand, within HP15_2219 at 2335.573 kb on + strand, within HP15_2219 at 2335.594 kb on - strand, within HP15_2219 at 2335.686 kb on - strand, within HP15_2219 at 2335.722 kb on + strand, within HP15_2219 at 2335.722 kb on + strand, within HP15_2219 at 2335.783 kb on - strand, within HP15_2219 at 2335.798 kb on - strand, within HP15_2219 at 2335.833 kb on - strand, within HP15_2219 at 2335.930 kb on + strand, within HP15_2219 at 2336.018 kb on + strand, within HP15_2219 at 2336.023 kb on + strand, within HP15_2219 at 2336.106 kb on + strand, within HP15_2219 at 2336.114 kb on - strand, within HP15_2219 at 2336.150 kb on - strand, within HP15_2219 at 2336.191 kb on - strand, within HP15_2219 at 2336.193 kb on + strand, within HP15_2219 at 2336.193 kb on + strand, within HP15_2219 at 2336.201 kb on - strand, within HP15_2219 at 2336.201 kb on - strand, within HP15_2219
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,333,718 - -0.7 2,334,605 - +1.0 2,334,625 + -0.2 2,334,818 + HP15_2218 0.19 +0.4 2,334,925 - HP15_2218 0.37 -0.3 2,334,950 - HP15_2218 0.41 +0.8 2,334,950 - HP15_2218 0.41 -0.9 2,334,950 - HP15_2218 0.41 +0.2 2,334,950 - HP15_2218 0.41 -1.0 2,335,000 + HP15_2218 0.49 +0.2 2,335,006 + HP15_2218 0.50 +0.2 2,335,016 - HP15_2218 0.52 -0.3 2,335,180 + HP15_2218 0.78 -0.4 2,335,180 + HP15_2218 0.78 -0.1 2,335,180 + HP15_2218 0.78 +0.1 2,335,190 + HP15_2218 0.80 -1.0 2,335,212 + HP15_2218 0.84 -0.1 2,335,417 + -0.8 2,335,425 + HP15_2219 0.11 +0.3 2,335,450 - HP15_2219 0.13 -2.3 2,335,462 + HP15_2219 0.14 +0.2 2,335,480 - HP15_2219 0.16 -0.4 2,335,525 - HP15_2219 0.20 -1.3 2,335,573 + HP15_2219 0.25 -1.3 2,335,594 - HP15_2219 0.27 -0.5 2,335,686 - HP15_2219 0.36 -0.4 2,335,722 + HP15_2219 0.39 +0.6 2,335,722 + HP15_2219 0.39 -0.6 2,335,783 - HP15_2219 0.45 -0.1 2,335,798 - HP15_2219 0.46 -0.4 2,335,833 - HP15_2219 0.50 -0.6 2,335,930 + HP15_2219 0.59 -0.6 2,336,018 + HP15_2219 0.67 -0.7 2,336,023 + HP15_2219 0.68 -0.1 2,336,106 + HP15_2219 0.76 +1.3 2,336,114 - HP15_2219 0.77 -0.7 2,336,150 - HP15_2219 0.80 -1.6 2,336,191 - HP15_2219 0.84 -0.0 2,336,193 + HP15_2219 0.84 -0.5 2,336,193 + HP15_2219 0.84 -0.3 2,336,201 - HP15_2219 0.85 -0.2 2,336,201 - HP15_2219 0.85 +0.4
Or see this region's nucleotide sequence