Experiment: m.b. Zinc 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c22440 and PGA1_c22450 overlap by 1 nucleotides PGA1_c22450 and PGA1_c22460 are separated by 590 nucleotides
PGA1_c22440: PGA1_c22440 - putative phage terminase, large subunit, at 2,328,102 to 2,329,865
_c22440
PGA1_c22450: PGA1_c22450 - hypothetical protein, at 2,329,865 to 2,330,323
_c22450
PGA1_c22460: PGA1_c22460 - hypothetical protein, at 2,330,914 to 2,331,669
_c22460
Position (kb)
2329
2330
2331 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2328.937 kb on - strand, within PGA1_c22440 at 2328.958 kb on + strand, within PGA1_c22440 at 2328.982 kb on + strand, within PGA1_c22440 at 2329.007 kb on - strand, within PGA1_c22440 at 2329.017 kb on + strand, within PGA1_c22440 at 2329.080 kb on - strand, within PGA1_c22440 at 2329.090 kb on - strand, within PGA1_c22440 at 2329.104 kb on + strand, within PGA1_c22440 at 2329.104 kb on + strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.112 kb on - strand, within PGA1_c22440 at 2329.151 kb on + strand, within PGA1_c22440 at 2329.267 kb on + strand, within PGA1_c22440 at 2329.294 kb on + strand, within PGA1_c22440 at 2329.335 kb on + strand, within PGA1_c22440 at 2329.434 kb on - strand, within PGA1_c22440 at 2329.434 kb on - strand, within PGA1_c22440 at 2329.451 kb on - strand, within PGA1_c22440 at 2329.472 kb on + strand, within PGA1_c22440 at 2329.490 kb on - strand, within PGA1_c22440 at 2329.517 kb on + strand, within PGA1_c22440 at 2329.520 kb on + strand, within PGA1_c22440 at 2329.521 kb on + strand, within PGA1_c22440 at 2329.525 kb on - strand, within PGA1_c22440 at 2329.525 kb on - strand, within PGA1_c22440 at 2329.529 kb on - strand, within PGA1_c22440 at 2329.529 kb on - strand, within PGA1_c22440 at 2329.539 kb on - strand, within PGA1_c22440 at 2329.539 kb on - strand, within PGA1_c22440 at 2329.539 kb on - strand, within PGA1_c22440 at 2329.597 kb on + strand, within PGA1_c22440 at 2329.605 kb on - strand, within PGA1_c22440 at 2329.605 kb on - strand, within PGA1_c22440 at 2329.613 kb on - strand, within PGA1_c22440 at 2329.638 kb on + strand, within PGA1_c22440 at 2329.642 kb on + strand, within PGA1_c22440 at 2329.642 kb on + strand, within PGA1_c22440 at 2329.650 kb on - strand, within PGA1_c22440 at 2329.675 kb on + strand, within PGA1_c22440 at 2329.677 kb on + strand, within PGA1_c22440 at 2329.677 kb on + strand, within PGA1_c22440 at 2329.677 kb on + strand, within PGA1_c22440 at 2329.677 kb on + strand, within PGA1_c22440 at 2329.682 kb on + strand, within PGA1_c22440 at 2329.685 kb on - strand, within PGA1_c22440 at 2329.685 kb on - strand, within PGA1_c22440 at 2329.685 kb on - strand, within PGA1_c22440 at 2329.685 kb on - strand, within PGA1_c22440 at 2329.718 kb on + strand at 2329.742 kb on - strand at 2329.752 kb on - strand at 2329.787 kb on + strand at 2329.909 kb on + strand at 2329.946 kb on - strand, within PGA1_c22450 at 2329.983 kb on - strand, within PGA1_c22450 at 2329.993 kb on - strand, within PGA1_c22450 at 2329.993 kb on - strand, within PGA1_c22450 at 2330.008 kb on - strand, within PGA1_c22450 at 2330.008 kb on - strand, within PGA1_c22450 at 2330.074 kb on + strand, within PGA1_c22450 at 2330.101 kb on + strand, within PGA1_c22450 at 2330.101 kb on + strand, within PGA1_c22450 at 2330.101 kb on + strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.109 kb on - strand, within PGA1_c22450 at 2330.146 kb on - strand, within PGA1_c22450 at 2330.155 kb on + strand, within PGA1_c22450 at 2330.155 kb on + strand, within PGA1_c22450 at 2330.163 kb on - strand, within PGA1_c22450 at 2330.195 kb on + strand, within PGA1_c22450 at 2330.209 kb on + strand, within PGA1_c22450 at 2330.222 kb on - strand, within PGA1_c22450 at 2330.245 kb on + strand, within PGA1_c22450 at 2330.303 kb on + strand at 2330.313 kb on + strand at 2330.313 kb on + strand at 2330.321 kb on - strand at 2330.321 kb on - strand at 2330.326 kb on - strand at 2330.378 kb on + strand at 2330.386 kb on - strand at 2330.386 kb on - strand at 2330.387 kb on - strand at 2330.406 kb on + strand at 2330.412 kb on - strand at 2330.418 kb on - strand at 2330.425 kb on + strand at 2330.425 kb on + strand at 2330.451 kb on + strand at 2330.489 kb on - strand at 2330.491 kb on + strand at 2330.499 kb on - strand at 2330.521 kb on + strand at 2330.555 kb on - strand at 2330.561 kb on + strand at 2330.569 kb on - strand at 2330.569 kb on - strand at 2330.569 kb on - strand at 2330.569 kb on - strand at 2330.638 kb on - strand at 2330.643 kb on - strand at 2330.654 kb on + strand at 2330.663 kb on - strand at 2330.730 kb on + strand at 2330.761 kb on + strand at 2330.761 kb on + strand at 2330.761 kb on + strand at 2330.769 kb on - strand at 2330.779 kb on - strand at 2330.892 kb on + strand at 2330.892 kb on + strand at 2330.900 kb on - strand at 2330.925 kb on + strand at 2330.932 kb on + strand at 2330.933 kb on - strand at 2330.933 kb on - strand at 2330.944 kb on + strand at 2330.944 kb on + strand at 2330.944 kb on + strand at 2330.944 kb on + strand at 2330.944 kb on + strand at 2330.952 kb on - strand at 2330.952 kb on - strand at 2330.952 kb on - strand at 2330.960 kb on + strand at 2330.962 kb on - strand at 2330.995 kb on - strand, within PGA1_c22460 at 2331.012 kb on - strand, within PGA1_c22460 at 2331.022 kb on - strand, within PGA1_c22460 at 2331.022 kb on - strand, within PGA1_c22460 at 2331.056 kb on - strand, within PGA1_c22460 at 2331.129 kb on + strand, within PGA1_c22460 at 2331.129 kb on - strand, within PGA1_c22460 at 2331.136 kb on - strand, within PGA1_c22460 at 2331.156 kb on + strand, within PGA1_c22460 at 2331.232 kb on - strand, within PGA1_c22460 at 2331.234 kb on + strand, within PGA1_c22460 at 2331.234 kb on + strand, within PGA1_c22460 at 2331.242 kb on - strand, within PGA1_c22460 at 2331.242 kb on - strand, within PGA1_c22460 at 2331.242 kb on - strand, within PGA1_c22460 at 2331.242 kb on - strand, within PGA1_c22460 at 2331.255 kb on - strand, within PGA1_c22460 at 2331.292 kb on + strand, within PGA1_c22460 at 2331.292 kb on + strand, within PGA1_c22460 at 2331.300 kb on - strand, within PGA1_c22460 at 2331.302 kb on + strand, within PGA1_c22460 at 2331.310 kb on - strand, within PGA1_c22460 at 2331.312 kb on + strand, within PGA1_c22460 at 2331.320 kb on - strand, within PGA1_c22460 at 2331.320 kb on - strand, within PGA1_c22460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.1 mM remove 2,328,937 - PGA1_c22440 0.47 +1.5 2,328,958 + PGA1_c22440 0.49 +0.0 2,328,982 + PGA1_c22440 0.50 +1.1 2,329,007 - PGA1_c22440 0.51 +1.7 2,329,017 + PGA1_c22440 0.52 +0.9 2,329,080 - PGA1_c22440 0.55 -1.4 2,329,090 - PGA1_c22440 0.56 -0.6 2,329,104 + PGA1_c22440 0.57 -0.7 2,329,104 + PGA1_c22440 0.57 -1.0 2,329,112 - PGA1_c22440 0.57 -0.4 2,329,112 - PGA1_c22440 0.57 +0.4 2,329,112 - PGA1_c22440 0.57 -1.3 2,329,112 - PGA1_c22440 0.57 -0.1 2,329,112 - PGA1_c22440 0.57 -0.4 2,329,112 - PGA1_c22440 0.57 +0.2 2,329,151 + PGA1_c22440 0.59 +0.7 2,329,267 + PGA1_c22440 0.66 +0.2 2,329,294 + PGA1_c22440 0.68 -0.6 2,329,335 + PGA1_c22440 0.70 +0.2 2,329,434 - PGA1_c22440 0.76 +0.8 2,329,434 - PGA1_c22440 0.76 +0.8 2,329,451 - PGA1_c22440 0.76 -0.8 2,329,472 + PGA1_c22440 0.78 -1.4 2,329,490 - PGA1_c22440 0.79 +0.1 2,329,517 + PGA1_c22440 0.80 +1.3 2,329,520 + PGA1_c22440 0.80 -1.4 2,329,521 + PGA1_c22440 0.80 +0.2 2,329,525 - PGA1_c22440 0.81 -1.6 2,329,525 - PGA1_c22440 0.81 +1.3 2,329,529 - PGA1_c22440 0.81 +0.4 2,329,529 - PGA1_c22440 0.81 -0.3 2,329,539 - PGA1_c22440 0.81 +0.2 2,329,539 - PGA1_c22440 0.81 -0.2 2,329,539 - PGA1_c22440 0.81 -0.4 2,329,597 + PGA1_c22440 0.85 +1.6 2,329,605 - PGA1_c22440 0.85 +0.5 2,329,605 - PGA1_c22440 0.85 -0.3 2,329,613 - PGA1_c22440 0.86 +1.1 2,329,638 + PGA1_c22440 0.87 -0.1 2,329,642 + PGA1_c22440 0.87 +0.7 2,329,642 + PGA1_c22440 0.87 +1.7 2,329,650 - PGA1_c22440 0.88 -1.3 2,329,675 + PGA1_c22440 0.89 -0.3 2,329,677 + PGA1_c22440 0.89 +0.4 2,329,677 + PGA1_c22440 0.89 +0.1 2,329,677 + PGA1_c22440 0.89 +1.8 2,329,677 + PGA1_c22440 0.89 +1.3 2,329,682 + PGA1_c22440 0.90 +0.2 2,329,685 - PGA1_c22440 0.90 +0.6 2,329,685 - PGA1_c22440 0.90 +0.2 2,329,685 - PGA1_c22440 0.90 +0.0 2,329,685 - PGA1_c22440 0.90 -0.6 2,329,718 + -0.8 2,329,742 - +0.0 2,329,752 - -1.3 2,329,787 + +1.4 2,329,909 + -1.1 2,329,946 - PGA1_c22450 0.18 +1.4 2,329,983 - PGA1_c22450 0.26 +0.4 2,329,993 - PGA1_c22450 0.28 +0.6 2,329,993 - PGA1_c22450 0.28 -0.6 2,330,008 - PGA1_c22450 0.31 -1.1 2,330,008 - PGA1_c22450 0.31 +1.0 2,330,074 + PGA1_c22450 0.46 +0.4 2,330,101 + PGA1_c22450 0.51 +0.1 2,330,101 + PGA1_c22450 0.51 -0.6 2,330,101 + PGA1_c22450 0.51 -0.4 2,330,109 - PGA1_c22450 0.53 +0.4 2,330,109 - PGA1_c22450 0.53 +0.0 2,330,109 - PGA1_c22450 0.53 -0.1 2,330,109 - PGA1_c22450 0.53 +0.2 2,330,109 - PGA1_c22450 0.53 +1.7 2,330,109 - PGA1_c22450 0.53 +1.8 2,330,109 - PGA1_c22450 0.53 +0.2 2,330,109 - PGA1_c22450 0.53 +0.1 2,330,146 - PGA1_c22450 0.61 +0.7 2,330,155 + PGA1_c22450 0.63 +0.0 2,330,155 + PGA1_c22450 0.63 -0.1 2,330,163 - PGA1_c22450 0.65 +0.2 2,330,195 + PGA1_c22450 0.72 +0.5 2,330,209 + PGA1_c22450 0.75 +1.5 2,330,222 - PGA1_c22450 0.78 -2.2 2,330,245 + PGA1_c22450 0.83 +0.8 2,330,303 + -0.5 2,330,313 + -0.4 2,330,313 + +0.3 2,330,321 - +0.5 2,330,321 - -0.2 2,330,326 - -0.1 2,330,378 + +0.7 2,330,386 - -0.5 2,330,386 - +0.0 2,330,387 - +0.6 2,330,406 + +0.2 2,330,412 - -0.7 2,330,418 - -0.8 2,330,425 + +1.6 2,330,425 + +0.3 2,330,451 + -2.0 2,330,489 - -0.4 2,330,491 + +0.4 2,330,499 - +0.3 2,330,521 + +0.9 2,330,555 - -0.1 2,330,561 + +0.3 2,330,569 - -1.3 2,330,569 - -1.4 2,330,569 - -2.1 2,330,569 - -0.1 2,330,638 - +0.0 2,330,643 - -1.0 2,330,654 + -0.6 2,330,663 - -0.8 2,330,730 + -0.1 2,330,761 + -0.7 2,330,761 + -0.1 2,330,761 + +0.4 2,330,769 - +0.2 2,330,779 - -1.1 2,330,892 + -0.5 2,330,892 + +0.6 2,330,900 - +0.0 2,330,925 + -1.4 2,330,932 + -0.5 2,330,933 - -0.7 2,330,933 - +0.4 2,330,944 + +0.0 2,330,944 + -2.4 2,330,944 + -0.4 2,330,944 + +0.1 2,330,944 + +0.1 2,330,952 - +1.6 2,330,952 - -1.2 2,330,952 - +0.8 2,330,960 + +0.4 2,330,962 - +0.0 2,330,995 - PGA1_c22460 0.11 +1.3 2,331,012 - PGA1_c22460 0.13 +1.0 2,331,022 - PGA1_c22460 0.14 +0.7 2,331,022 - PGA1_c22460 0.14 +0.7 2,331,056 - PGA1_c22460 0.19 -2.6 2,331,129 + PGA1_c22460 0.28 +0.9 2,331,129 - PGA1_c22460 0.28 +0.8 2,331,136 - PGA1_c22460 0.29 -0.4 2,331,156 + PGA1_c22460 0.32 -0.3 2,331,232 - PGA1_c22460 0.42 +1.0 2,331,234 + PGA1_c22460 0.42 -1.7 2,331,234 + PGA1_c22460 0.42 +0.2 2,331,242 - PGA1_c22460 0.43 -0.4 2,331,242 - PGA1_c22460 0.43 -0.5 2,331,242 - PGA1_c22460 0.43 +0.0 2,331,242 - PGA1_c22460 0.43 +0.1 2,331,255 - PGA1_c22460 0.45 +0.5 2,331,292 + PGA1_c22460 0.50 -0.2 2,331,292 + PGA1_c22460 0.50 +1.9 2,331,300 - PGA1_c22460 0.51 -0.7 2,331,302 + PGA1_c22460 0.51 -0.2 2,331,310 - PGA1_c22460 0.52 -1.4 2,331,312 + PGA1_c22460 0.53 -0.5 2,331,320 - PGA1_c22460 0.54 -2.4 2,331,320 - PGA1_c22460 0.54 -0.1
Or see this region's nucleotide sequence